Ricinus communis (castor bean): 8263118
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Entry
8263118 CDS
T01087
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X3
KO
K08775
breast cancer 2 susceptibility protein
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03440
Homologous recombination
rcu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
8263118
03460 Fanconi anemia pathway
8263118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcu04121
]
8263118
03036 Chromosome and associated proteins [BR:
rcu03036
]
8263118
03400 DNA repair and recombination proteins [BR:
rcu03400
]
8263118
Ubiquitin system [BR:
rcu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
8263118
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
8263118
DNA repair and recombination proteins [BR:
rcu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
8263118
FA (Fanconi anemia) pathway
Downstream FA components
8263118
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
8263118
NCBI-ProteinID:
XP_025014463
LinkDB
All DBs
Position
10:complement(6660327..6669429)
Genome browser
AA seq
1040 aa
AA seq
DB search
MSTWQIFSDAGKSFRWESSSQILHSDRPNDAAIQPHSCRTPPLPSMADLLLQGCTKLLEN
GVEDGNPMMFRTGLGKSVVLKQSSISKALSVLGDDDDGLSSGNIGETHARENAHGFTHSL
FCTGSGKSVNVSSAGLVRAKTLLGLENSNGISCSEGFQHPRKSTNAPEQNVWPNLSHSTM
NKGMENSAMHDVTVPRSSLISKTSLNGHELSNVVNPNLLQSEVHNSITKPPSIKFHTAGG
RSLSVSSDALKRAKSLLGDPDLGNFLNEEDVVDPALSVFNENRLNDTSSTKETDFRSTFT
YPGIAKSKYISKVFISPLKSSSHQVQSSFNSENAISGVSLIKKFDAVDDKRFLGLNGTLS
SMQKPLCNGPCEPDAVEDNSLAHGIGSRINLLARSSSGPLVDISNTIGSCYTNHRHDNSE
KKRVGRRSSTSPFKRPRSCKFTTPLNRNYAYAPSGLSASSSENSGFRHSISTRYPYQGSR
MYIKDYFRVPSFDKSMLEHFADQVICIKPDTAEKYTFWDESGLSGLGSEAFHDMLVQSGA
SVQFASKEWVTNHYKWIVWKLACYGRFYPLKSATRFLTVSNVLEELKYRYEREVNHGHRS
AIKRILEGDAPPSSMLILCISAIRISCQPKIETPALDGSDYSNAEKVELTDGWYSVDAIL
DVPLSKQLASGKLFVGQKLRIWGARLCGWVGPVSPLEVLASRTVSLLLHINGTYRAHWAD
RLGFCNGVSPPLAFRCIKSNGGPVPQTLVGVTRLYPVLYKEKLCDGGSIVRSERMEAKAM
QLYSQRHSAVVEGIVSEFQREMKGSHIYNDSDSEEGAKILKILETASEPEVIMAEMSPEQ
LTSFASYQAKLEATKQMDMEKTIKGALQEAGLREREVTPFMRVRVVGLTNNQGKGILKEG
LITIWNPTEKQKTELVEGQAYAVAGLLPVNSDSNTLYLQARGSATKWLSLSSLAIQHFQP
FFSPRESVSLSNLGEVPLSSEFDTAAYVVYVGEVYTTAQWKKQWVFVIDNSISTLKSEEI
SNSLLAISFCTPCINDGWLL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggcagatattctccgacgccggaaaaagtttccggtgggagtcgtcaagc
caaatcctccatagcgaccgaccaaacgatgctgcgattcaacctcatagctgccgtact
ccacctctcccttctatggctgatctcttacttcaaggatgtacgaagcttctagagaat
ggcgtcgaagatggaaatccgatgatgttccgtacaggattagggaaatcggttgtgcta
aaacaatcttcaatttcgaaagcgttgtctgttcttggagatgatgatgatggacttagc
tcaggaaatataggtgaaacacatgctagagaaaatgcacatggattcacccactccctc
ttttgtactgggtctgggaagtcagttaatgtatcttctgcaggcctggtcagagccaag
acattgttgggtttggaaaatagtaatggtatctcctgttctgaaggttttcaacaccct
aggaaatcaaccaatgcccctgaacaaaatgtgtggccaaatttatcacattcaaccatg
aataagggtatggaaaatagtgcaatgcatgatgtgacggttcctaggtcatctttaatt
tctaagactagtttaaatggacacgagctatcaaatgtggtcaatccaaacttgttgcaa
tctgaagtccataattccataaccaaaccaccttcaatcaaattccacaccgcaggtggc
agatccttatcagtttccagtgatgcattgaaacgtgcaaaaagccttcttggtgaccca
gacttgggtaatttcttaaatgaggaggatgtggttgatccagccctttcagttttcaat
gagaatagacttaatgatacttcatccaccaaggaaacagattttcgctctacttttact
tatccaggaattgcaaagagcaagtacatctcaaaagttttcatatcccctcttaaatca
tcttcacaccaagttcagtcttccttcaattcagaaaatgctatttcaggagttagtttg
atcaagaaatttgatgcagttgatgacaaaaggtttcttgggttgaatggtactctatct
tccatgcagaagcctttatgcaatggcccttgcgaaccagatgcagttgaggataattcc
ttggcgcatggtattggttcaaggattaatctacttgcaagatcatctagtgggccgttg
gttgacatttcaaacacaatcggctcttgttacacaaatcacagacatgataatagcgaa
aaaaagagagttggaaggagaagttctacttctccattcaagaggccccgcagctgcaaa
tttaccacccctttgaacaggaattatgcatatgctcctagtggtttatctgcttcatca
tctgaaaattccggctttagacatagcatttccactagatatccttatcaaggttcaaga
atgtatattaaggactatttcagagtgccttcatttgacaaaagcatgctagagcacttc
gcggaccaagtaatatgtattaaaccagatactgcagagaagtacacattttgggatgaa
tctggccttagcggccttggatctgaagcttttcacgatatgttggttcagtcaggagct
tcggtacaatttgcttctaaagagtgggtaacaaatcattacaaatggatagtttggaaa
ctagcatgttacgggagattctatccattgaaatctgcaacaagatttttgacagtctcc
aatgtgcttgaggaactgaagtatagatatgaaagagaagtaaatcatggccaccgttct
gcgattaagagaattttggaaggtgatgcaccgccctcttcaatgttaattctatgcatt
tcagctatccgtatcagctgtcaaccaaagattgagactccagcattagatgggagtgat
tatagcaatgctgaaaaagttgaactaactgatgggtggtattcagtagatgctattttg
gatgtaccgttgtcaaagcaacttgcttctggaaaattgtttgtgggtcagaaacttcga
atatggggagcaagattatgtggctgggttggtcctgtttcgcctcttgaggttcttgca
tcaaggacagttagcttgttgttgcatataaatggaacatatagagctcattgggctgac
cgactaggattttgtaatggtgttagtcctcctttggcatttaggtgcatcaaaagtaat
gggggtcctgtccctcagacattggttggagtcacaagactctatcctgtcctctacaag
gagaagttatgtgatggtggatctattgtgagatcagagagaatggaggctaaagcaatg
cagttgtacagccagaggcactctgctgttgtagaaggcattgtgtctgaattccaaaga
gagatgaaaggatcccatatctataatgatagtgatagtgaagaaggtgctaaaattttg
aagattcttgagacggcatcagaaccagaagttataatggcagagatgagtccggagcaa
ctaacttcatttgcctcttaccaagcaaaactagaggcaactaagcaaatggacatggag
aaaacaatcaagggagctttgcaagaggctggcttgagggaaagagaagtgaccccattt
atgagggttagagtggtcggcttaactaataatcagggaaagggcatcctcaaagaaggc
ttaataacaatttggaacccaacagagaagcaaaaaactgagctggtcgagggacaggca
tatgctgtagcaggacttcttccagtgaactctgactcaaatacgctttacttacaagca
agaggatctgcaaccaaatggctgtccttatcttccctagcaatccaacactttcagccc
tttttcagtcctcgagaatcagtatcgttgtcaaatttgggtgaagttcccctttccagt
gaatttgatactgctgcttatgttgtgtatgtgggagaggtttatacaactgctcagtgg
aagaaacaatgggtttttgtcattgataactctatttcgaccttaaagtcagaagaaata
tcaaattccttacttgccatcagcttctgcacaccatgtataaatgatggttggcttctt
taa
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