Ricinus communis (castor bean): 8263281
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Entry
8263281 CDS
T01087
Name
(RefSeq) tRNA pseudouridine synthase A isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcu03016
]
8263281
Enzymes [BR:
rcu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
8263281
Transfer RNA biogenesis [BR:
rcu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
8263281
Prokaryotic type
8263281
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
8263281
NCBI-ProteinID:
XP_002526453
UniProt:
B9SKD4
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Position
6:complement(16305572..16311541)
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AA seq
372 aa
AA seq
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MTENPKHSLDTESRNRPSKILKTQDFVDDNEEGEEELQESSFVAESMSSNPKLQRYLIAV
EYIGTKFAGSQKQLNGRTVVGVLEEAFCKFIGQQVSVSLSSRTDAGVHALSNVCHVDIER
ISKRKPGEVLPPHEPAVVRRAVNHFLQKNEGDIMVTDVRCVPSDFHARFKAQERTYFYRF
LSGPEPLSTFEKDRAWHVLEDLDIVAMQEACKVLVGHHDFSSFRASGCQAKSPIRTLAEI
SVSEVASTLYFPSITEREQNCENGENSCCKKFKTDLPMGSHSNTNVAESSFGETDLGFGI
RRRHRCFVVTARARSFLYHQVRLLVGVLKSVGIGDLTTSDVERILSAKSVTAASPMAPAC
GLYLGHVKYDLP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgacagagaaccccaaacactcattggatactgaatcccgaaatagaccatcaaagatc
ctaaaaacacaagatttcgttgacgacaacgaagaaggagaagaggaattgcaagaatca
agctttgttgctgaatctatgagctcaaaccctaagcttcaacgatatttaattgctgtt
gagtatattgggactaaatttgccggttcacagaagcaacttaatggcagaacagttgtt
ggagtccttgaggaagcattttgtaaatttatagggcagcaagtatcagtctctttgtca
agtcgaactgatgcaggagttcatgccttatcaaatgtttgccatgttgatattgaacgt
atcagcaaaaggaagcctggtgaagtgttaccaccgcatgaaccggcagtagttagaaga
gctgttaaccatttcttacagaagaatgaaggtgacatcatggtgactgatgttcgatgt
gttccttccgacttccatgcaagatttaaagctcaagagcgcacgtacttctaccgcttc
ctatctggaccagagcctttgtctacctttgaaaaagatcgggcatggcatgttcttgaa
gacctagatattgtcgctatgcaggaagcatgtaaagttcttgttgggcatcatgatttc
agttccttcagggcgtctggttgtcaggcaaaatcacctattagaactttggctgaaatc
tccgtttctgaagtggcttcaactctgtattttccatcaatcacagagagggaacagaac
tgtgaaaatggggaaaactcatgctgcaaaaaatttaagaccgacctgccgatgggatct
cattccaatactaacgtagctgagagctcctttggtgagactgatctaggatttgggata
aggagaagacaccgttgcttcgttgtaacagcacgtgcccgttcttttctttaccaccag
gttcgacttcttgttggggttctcaaatctgttggcattggagatctaacaacttcagat
gtcgaaagaatactcagtgcaaagtctgttactgctgcaagccctatggcccctgcttgt
ggtctctaccttggacacgtaaagtatgatctgccatga
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