Ricinus communis (castor bean): 8263305
Help
Entry
8263305 CDS
T01087
Name
(RefSeq) OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 6 isoform X1
KO
K12655
OTU domain-containing protein 5 [EC:
3.4.19.12
]
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rcu01002
]
8263305
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcu04121
]
8263305
Enzymes [BR:
rcu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
8263305
Peptidases and inhibitors [BR:
rcu01002
]
Cysteine peptidases
Family C85
8263305
Ubiquitin system [BR:
rcu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
8263305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
Peptidase_C65
UBA_9
UBA
Motif
Other DBs
NCBI-GeneID:
8263305
NCBI-ProteinID:
XP_015577649
LinkDB
All DBs
Position
8:complement(13868433..13874178)
Genome browser
AA seq
580 aa
AA seq
DB search
MRIVRGMQKLFHGEEELNLGWKNSFSKGIGVTVPKVSVIESNKIETMTRILVQRGSGSSS
SNQSRAGSSSAARSEIQGAATPQVISALKDDEIVDEAQQLHVVDELLEYCGSSEIKAAKN
DELPMEGLNSDKNESSSSEVVDNEKLVNAEGVRSGELVKGLDRLRVTERPTPESDGSSSG
SPDVGSGSPQPPPPPVPPPKPLATNSSSRRSVSGISNAVRTGSSRRAVAWPVVSTRTSPS
GSRPSSPRSHGDSEGYNSADEQNPCFGSSYDDLERERQFEIDIRRSKGLEVKRMLEDGNC
LFRAVADQVYGDSEVYDLTRQMCIDYMERERDHFSQFITEGFTSYCKRKRRDKVYGNNVE
IQALSEMYNRPIHIYSYTTEPINIFHGSYNTDTPPIRLSYHHGNHYNSLVDPRRLTVGAG
LGFSCLRGTNVDKDQVKAAIKAQQDQQIDNALLAEGRFYSDLELTEKEIERMVMEASRAE
YLANDKFKQQLCHKESSTSGAEPSSSGARSSDSETKVEGTRTNSLQDTVLSSSMQMVLSM
GFSYLQAIEAYSIFGDDVDSMVCYLLETASSSRRKGKATE
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgttaggggaatgcagaaattgtttcacggcgaggaggagctgaatctgggc
tggaagaattccttcagcaaaggaattggcgtcactgtgcccaaggtttcagtaattgag
agcaataaaattgaaacaatgactcggattttggttcaacgaggcagtggttcttcttct
tcaaaccagagccgggcagggtcctcttcagctgctcggtcagagattcaaggtgcagct
acccctcaggtcatttcagctctgaaagatgatgaaattgttgatgaggcacagcaactt
catgttgtggatgagctcttggagtattgtgggagtagcgagatcaaggctgcaaaaaat
gatgagctaccgatggaaggcttaaatagtgataaaaatgagagttcgagtagcgaagtt
gttgataacgagaaactggtcaatgctgagggtgtcagatcaggggaattggtaaaagga
ttggatcggctgagggtaacggagagacctacacctgagagtgatggttcaagcagtggt
tccccagatgttggcagtggaagcccgcaaccaccaccccctcccgtgccacctccaaaa
cctttggcaacaaactcaagctcaaggagatctgtatcaggaatttctaatgctgtgcga
actggatcatctagaagagcagttgcttggcctgttgtttccacaagaacttcaccatct
ggatcacggccttcctcccctaggtctcatggcgacagtgaggggtataatagtgctgat
gagcagaacccttgctttggttcctcctatgatgatctggaaagagagcgccaatttgag
attgacataaggcggtctaaaggactagaagtcaaaagaatgctagaggatgggaattgt
ctcttccgtgctgttgctgatcaagtatatggagattctgaagtatatgatctgactaga
caaatgtgcatagactatatggaacgggagagggatcacttttctcaatttattacagaa
ggctttacatcttactgtaagagaaagagaagagacaaggtttatgggaacaatgtggag
attcaagctttatcagaaatgtataaccgacctatccatatttactcatataccacagag
cctatcaacattttccatggaagctacaacactgatacgccacccataaggctaagttac
catcacggaaatcactataattctcttgttgacccacgtcgactgacagttggtgcagga
cttggtttcagctgtcttcgagggacaaatgtggacaaggatcaggtgaaagctgcaatt
aaagctcaacaagaccagcagattgacaatgcacttttagctgaggggcgattttactca
gatcttgagcttactgagaaagagattgaaagaatggtgatggaagcttctcgtgcagag
tatctggccaatgataagttcaaacagcaactttgtcacaaagaatcttctacatctggt
gctgaaccatcttcttctggagcaagatcatcagacagcgagactaaggtggaaggcacg
aggacaaacagtttgcaggatactgtacttagcagtagcatgcagatggttctgtcaatg
ggattcagctatctgcaagcgattgaggcatacagcatatttggtgacgatgtggattca
atggtctgttacctcttggaaactgccagtagcagcagacgaaaaggcaaagcgactgaa
tga
DBGET
integrated database retrieval system
