Ricinus communis (castor bean): 8263332
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Entry
8263332 CDS
T01087
Name
(RefSeq) sm-like protein LSM8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03018
RNA degradation
rcu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8263332
09123 Folding, sorting and degradation
03018 RNA degradation
8263332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8263332
03041 Spliceosome [BR:
rcu03041
]
8263332
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
8263332
mRNA degradation factors
5'-3' decay
Lsm complex
8263332
Spliceosome [BR:
rcu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
8263332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
8263332
NCBI-ProteinID:
XP_002523867
UniProt:
B9SCZ8
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Position
8:complement(13764166..13766374)
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AA seq
98 aa
AA seq
DB search
MSTGPGLESLVDQNISVITNDGRNIVGILKGFDQATNIILDESHERVYSTKEGVQLHVLG
LYIIRGDNISIVGELDEELDSNLDLASLRAHPLKPLIP
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccggccctggactcgagtcccttgtagatcaaaatatttcagttatcactaat
gatggccgcaatatagtgggaatcctgaaaggctttgaccaggccacaaatattatcctt
gacgaatcgcatgaacgtgtttactccactaaggagggtgttcaactacatgttctggga
ctgtacataataaggggtgacaacataagcattgttggggaacttgatgaagaactggat
tcgaatcttgacttggcaagcctaagagctcatccactgaagccactcatcccttga
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