KEGG   Ricinus communis (castor bean): 8263332
Entry
8263332           CDS       T01087                                 
Name
(RefSeq) sm-like protein LSM8
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03018  RNA degradation
rcu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    8263332
  09123 Folding, sorting and degradation
   03018 RNA degradation
    8263332
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcu03019]
    8263332
   03041 Spliceosome [BR:rcu03041]
    8263332
Messenger RNA biogenesis [BR:rcu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     8263332
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     8263332
Spliceosome [BR:rcu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    8263332
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-GeneID: 8263332
NCBI-ProteinID: XP_002523867
UniProt: B9SCZ8
LinkDB
Position
8:complement(13764166..13766374)
AA seq 98 aa
MSTGPGLESLVDQNISVITNDGRNIVGILKGFDQATNIILDESHERVYSTKEGVQLHVLG
LYIIRGDNISIVGELDEELDSNLDLASLRAHPLKPLIP
NT seq 297 nt   +upstreamnt  +downstreamnt
atgtctaccggccctggactcgagtcccttgtagatcaaaatatttcagttatcactaat
gatggccgcaatatagtgggaatcctgaaaggctttgaccaggccacaaatattatcctt
gacgaatcgcatgaacgtgtttactccactaaggagggtgttcaactacatgttctggga
ctgtacataataaggggtgacaacataagcattgttggggaacttgatgaagaactggat
tcgaatcttgacttggcaagcctaagagctcatccactgaagccactcatcccttga

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