Ricinus communis (castor bean): 8263452
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Entry
8263452 CDS
T01087
Name
(RefSeq) sister chromatid cohesion 1 protein 4 isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcu03036
]
8263452
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
8263452
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Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
8263452
NCBI-ProteinID:
XP_015572225
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Position
7:complement(29177640..29190331)
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AA seq
1264 aa
AA seq
DB search
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEVPIALRLSSHLL
LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
LPDNDIFQGNYIDHHVSTREQITLQDTMDGAVYSTSQFGLDERFGDGDTSQVGLDLEEDL
FLGKVAATGHDEISENDAQTSVELLEPSKTVASHERMTGTSEEMPLNGTRSKIEDLAANL
EVIDYAQAPSTPGLMEEPNLSSVKDCLVCDDHLESEDHNVRGLGGMEISKNAPSKSALHH
GDDARDLSLVDHLSHDTIAYMPTEEHSRLSGDLEINQAGLEGELLSTAVTSEHGPADETV
SRQDESHQIEDKNKVVSSDNGETVTSIDQINGDYEESLAETNDNKFSNKIGECLLNGKVA
PMPAHSSGLPTALETVNVEGQDGQGQEDSETLLDHVNNEQMKPTCISVLLPCNSHLSQPD
ILSGEADTSVLVSDLQSVDVAPLSSETVQREEGLHTSGTSTKVQGEECHVTDVVQSEENQ
ISDPTLNGETQEDGGKHDVRLDNEISNNNQNENLTSPTTTELPAPEKLLSIPQTLLDKPH
DLLVETPDKEVQEEGDGSGAGIRITGKKRSFAESALTVQSLNSVESFGVTRSKRTVESIP
DDDDLLSSILVGRKSSALKMKPTPPAPEVPSMKRARFTSRPSALKRKVLMDDSMVLHGDI
IRQQLTNTEDIRRLRKKAPCTRTEILMIQRQFLEDEIFSEPVLTGMSAYLTRMHSEAFDW
SGIKVCENDDNNMASLEVVNDEHSARQIVKQDGGMEGSTEPVGCRTDIEEQTSEVSINKD
NQQVEDHLGSYDIDNEHMNGVVDIVGHRTSVHEHLGETSEMENDKVNSEVSDAINHSAPG
LETSQSEPASGDILEMPSATVDQSVILDKAIGTHEPMQVDTPIIPSDEIHNQLIEDVAGL
RDMSNDIGLDCTEVVDNCAKKIGAVEAELRTGEELLLEESKVRASVEIGGDEQVDGSAPN
DGADASLANVSSEAGSFVNFSSVNIDQAFEEIENYKHGVFSDNGGLGGNSMGIDDKDQTS
DHLCSEEAKINSTYTIGLDGDFKNTSMNDGDNTVSQLVDQQDTMDTQNAPPDHVTTGECD
QDIRDVGFANDTEFLNVDDDEIDEDDNEGLPNAEDPRLLENSGWSSRTRAVAKYLQTLFD
KEAEHGRKVLLMDNLLTGKTRKEASRMFFETLVLKTKDYVHVEQGKPFDNINIKPRAKLM
KSDF
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgttttattcccagtttatattggccaagaaagggcctttagggactatatggatagca
gctcatttggagagaaagcttcgaaagaaccaagttgctgatactgacattggtgtctcc
gtagattccattctctttcctgaagtaccaattgcactcaggctgtccagtcatcttctg
cttggtgtggtgaggatatattctagaaaggtgaattaccttttcgatgactgcagtgag
gctttgctaaagataaagcaagcttttcgttccacagcagttgatttaccaccagaagaa
tcaactgctccatatcactctattacattgcccgagacttttgatcttgatgactttgag
ctgccagataatgatatttttcaaggtaactacattgaccaccatgtcagtacaagggag
cagattacactccaagacacaatggatggtgcagtctactctacatcacaatttggctta
gatgagcgctttggtgatggtgacacttctcaagttggattggaccttgaagaggacctg
tttctaggcaaggttgcagcaacagggcatgatgaaatttctgaaaatgatgctcagaca
tctgttgagctattggagccttcaaaaacagttgcaagtcatgaaaggatgactggaact
tctgaagaaatgccattgaatggtactagaagcaagattgaagatcttgctgccaatttg
gaggtcattgactatgcccaggctccatcgacccctggattaatggaagagccaaacctg
tctagtgttaaggactgtctggtctgtgatgatcatttagagtcggaagatcacaatgta
agaggattaggaggaatggagatatcaaaaaatgcgcctagtaaatcagctcttcatcat
ggggatgatgcaagggatttgtctttggttgatcatttaagtcatgatacaattgcgtac
atgcctactgaggagcacagccgcctttctggtgacttggagatcaatcaggcagggcta
gaaggagaattactttctacagcagtgacttcagaacatggtcctgcagatgagactgtt
agccgacaggatgagtcacaccagatagaagataaaaataaagttgtttcatccgataat
ggtgagactgtgacatctattgatcaaatcaatggagattatgaggaatccttagctgaa
actaatgataataagttttccaataaaattggagaatgtctcttaaatggaaaagtagca
ccaatgcccgcccattcatcaggactgcctactgctttagagactgtcaatgttgaaggt
caggatggtcagggacaggaggattctgaaacattactggaccatgttaataatgagcag
atgaaacctacttgcataagtgttctccttccatgcaattcccatctgagccagcctgat
atcttatctggtgaagctgatacttctgttctcgtttctgacttacaatcagtagatgtt
gcaccattgtcgtcagagacagttcaaagggaggaaggtcttcatacttctggaacttcc
actaaggtgcaaggtgaagagtgccacgtgactgatgttgtacagtcagaggaaaatcag
atatctgatccaactttaaatggagaaactcaggaagatggaggaaaacatgatgttcga
cttgacaatgaaatatctaataataaccagaatgaaaatttgactagtcccacgacgact
gaattgcctgctcctgaaaagttgctttccattccccagacacttcttgataaaccacat
gatttgttagttgagacacctgataaagaagttcaagaagagggtgatggaagtggtgct
ggtatcagaattactggaaaaaagcgtagttttgctgaaagcgcgttaactgtacagagt
ttaaattcagttgaatcatttggagtgactagatcaaagagaactgtggagtctattcct
gatgatgatgacttgctatcttctatattagttggtagaaaatcttcagctttgaaaatg
aagcccactccacctgcacctgaagtaccatctatgaagcgtgctcggttcacctctcga
ccaagtgcattgaaaaggaaggtgcttatggatgattcaatggttctgcatggcgatatc
atacgccaacaactgactaacactgaggacatacgtcgcttgcgtaaaaaggccccctgc
acacgcactgaaattttgatgattcagaggcaatttctggaagatgaaatttttagcgaa
ccggtactaactggtatgtcagcatatctgacacgcatgcacagtgaagcatttgattgg
agtggaatcaaggtttgtgaaaatgatgataataacatggcttctttggaagtggtaaat
gatgaacattctgccaggcaaattgtcaagcaagatggtggaatggaagggagcacagaa
cctgttggttgcagaactgacattgaggaacaaacctctgaggtttccattaataaggat
aatcagcaggttgaagaccacttaggatcttatgatattgataatgagcacatgaatggt
gttgttgacatagttggtcatagaacttcagtacatgaacatttgggagaaacaagtgaa
atggaaaatgataaagtaaattctgaagtctctgatgccataaatcattcagctcctggg
ttggagacatcccaaagtgagccagcgtctggtgatatccttgaaatgccatctgctact
gttgatcagtcagttatcttggacaaagcaattggtactcatgaacctatgcaggtggat
actccaataataccatcggatgagattcataatcaactgattgaggatgttgctggctta
agggatatgagcaatgacataggacttgattgtactgaagtagttgacaactgtgcaaag
aaaattggtgcagttgaagctgaattgcggacaggggaagaacttctgttggaggaaagc
aaagttcgtgcatcggttgaaattggaggagatgaacaggtagatggttctgcacctaat
gatggtgcagatgcttctcttgctaatgtgtcttctgaggctggtagctttgttaatttt
agttctgtaaatattgaccaagcttttgaagagattgaaaattataagcatggggttttt
agtgataatgggggcctgggtgggaattccatgggcattgatgacaaggaccaaacctct
gatcatttgtgtagtgaagaagctaaaataaactctacatatacaataggactcgatggg
gattttaaaaacacttcgatgaatgatggagataatacagtatctcaactagttgatcag
caggacaccatggatacacaaaatgctcctcctgaccatgttaccacgggagaatgtgat
caggatattcgagatgtcggatttgcaaatgatacagaatttttgaatgtagacgatgat
gaaatagatgaagatgacaacgaaggattgccaaatgctgaagatcctcgcctgcttgaa
aatagtgggtggtcttcccgcaccagagctgttgccaagtaccttcaaactttatttgac
aaggaagcagagcatggaagaaaagttctgttaatggacaacctgctcactggcaaaact
cgtaaggaagcatcaagaatgttcttcgagactttggttcttaaaacaaaggattacgtc
catgttgaacaggggaagccttttgataacatcaatataaagccacgagcaaagctaatg
aaatcagacttctga
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