Ricinus communis (castor bean): 8263537
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Entry
8263537 CDS
T01087
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 13
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
8263537
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rcu04040
]
8263537
Ion channels [BR:
rcu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
8263537
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
8263537
NCBI-ProteinID:
XP_048231271
LinkDB
All DBs
Position
1:complement(10703653..10707229)
Genome browser
AA seq
718 aa
AA seq
DB search
MKGNKFVRFQDWSSEKSFNSERLSVYSSDDGFYARKVKPSISAVRDSIHRSWEIGYERIK
SVRKPSRKNQQPKAASRTKKRILDPQGPFLQKWNKIFVIACFIAVSLDPLFFYIPVIDGE
KKCLDLDKNLEAIACVLRTFIDAFYVLHIIFQFRTGFIAPSSRVFGRGELVDDPVIIAKK
YLTSNFIVDVLSILPLPQVTVLFIIPSVRGPVSLIAKDLLKVVIFSQYVPRVWRILPLFR
EVTRSSGILTETAWAGAVYNLCLYMLASHTLGAIWYLLSIEREDTCWRNVCKAPGCNKSV
DLYCGDDRKDNPELSNFLKASCPFIQPDEINSSTVFNFGIFFDALESEIVESWDFPKKFC
YCFWWGLRNLSAVGQNLKTSTFVGEILFAVFVCIAGLVLFSLLIGNMQKFLQSTTVRVEE
MRVKRRDADQWMAHRMLPEHLRERIRSYQQYKWQQTRGVEERTLIHTLPKDLRRDINRHL
CFDLIMRVPMFAKMDEQILDAICDRLRPALYTKESYIVREGDPVDEMLFIMRGDLLSVTT
NGGRTGFFNAANLKAGDFCGEALLTWALDPQSTSNLPISSRTVQALSEVEAFALVAEDLK
SVASQFRRLHHKDIQHTFRFFSVQWRTWAACFIQAAWRRHCRRKQANYLCQAEDRLQDVL
AKEAAACPSLGATIYASQFAANALRNLRQNGGRAPRVPQRLALVPQKPIDPDFSVHNR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaagggaaataaatttgtgaggtttcaagattggagttcagagaaatcctttaattca
gagaggttatccgtatattccagtgatgatggattttatgcaagaaaagtaaagccgtct
ataagcgctgttcgcgatagtattcaccgatcctgggagataggttatgaaagaattaaa
agcgtcagaaaaccatcaaggaagaatcagcaaccaaaagcagcatcccggactaaaaag
agaattcttgatccacagggtccgtttcttcaaaaatggaacaaaatatttgttattgct
tgtttcattgcagtgtctttagaccccctgttcttttacattccggtgattgacggtgaa
aagaaatgccttgatttggacaagaatttggaagcaattgcttgtgttcttcgaacattt
atcgatgccttttacgtacttcatataatttttcagttccgtactgggtttatcgcccct
tcttctcgtgtatttggaaggggtgagcttgttgatgatcctgtcattatagctaaaaag
tatttgacatccaactttatcgttgatgttctctcaattctgccacttcctcaggtaaca
gttctattcatcattccaagcgtgcgcggtccggtttctttgattgcaaaagacctgctg
aaggttgtaatattttcacagtatgtgccaagagtatggagaatattgccgctgttcagg
gaagtgaccagaagttctggtatacttactgaaactgcatgggctggagctgtttataat
ctatgcctttatatgctagccagtcatacacttggagccatttggtacttactgtcgata
gaacgtgaagatacatgttggcgtaatgtgtgcaaggcccctgggtgtaataagtctgta
gatttatactgtggagatgacagaaaagataatcctgagttgagcaactttctgaaagca
tcatgcccttttatccagcctgacgaaattaatagctcgactgtctttaacttcggaata
ttctttgatgctctagaatctgaaattgtggagtcatgggattttccgaagaaattttgt
tactgcttttggtggggtctgcgtaatctaagtgctgtgggccagaacctgaagacaagc
acttttgttggggagattctgtttgctgttttcgtatgcattgctggattggttttattt
tcattactcattggcaatatgcagaaattcctgcaatcgacgactgtcagagtggaggaa
atgagagtgaaaaggcgtgatgcagatcagtggatggcccaccgtatgcttcctgagcac
ttgagggagcgaataaggagttatcagcagtataaatggcaacaaactagaggtgtggag
gagcggactctgatccacacacttcctaaagatctcagaagggatataaatcgccatctt
tgtttcgatctaattatgagagtgccaatgtttgcaaaaatggatgagcagatactggat
gcaatatgtgatcgtctcaggccagccctttacacaaaggaaagttacattgttcgcgag
ggggatccagttgatgagatgctatttatcatgcgtggtgatctactgagtgtgaccaca
aatgggggaaggactggctttttcaatgctgctaatctcaaggccggtgacttctgtgga
gaagcgctacttacatgggcattggatccccaatcaacctccaatcttcctatctcaagt
agaactgtgcaagctttatcagaggttgaagcctttgctctagtggctgaagatttgaaa
tctgtcgcctcccagtttcgtcgtcttcaccacaaggatatccagcatacattcaggttc
ttctcagtgcagtggaggacatgggcagcatgcttcatacaagcagcttggcgccgtcat
tgtaggagaaagcaagctaattacctttgccaagcagaagacagattgcaagatgttctg
gcaaaggaggctgcagcatgtccaagccttggcgccaccatctatgcatcccagtttgcc
gccaatgcattaagaaatttaaggcagaatggcggacgcgccccaagagtgccacaaaga
ttagcattggtgcctcagaagccaatcgaccctgatttttccgttcacaatcgttag
DBGET
integrated database retrieval system
