Ricinus communis (castor bean): 8263763
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Entry
8263763 CDS
T01087
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
8263763
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rcu01009
]
8263763
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8263763
03036 Chromosome and associated proteins [BR:
rcu03036
]
8263763
Protein phosphatases and associated proteins [BR:
rcu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
8263763
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
8263763
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
8263763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_8
EF-hand_1
EF-hand_5
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
8263763
NCBI-ProteinID:
XP_002528837
UniProt:
B9SS68
LinkDB
All DBs
Position
9:4444276..4451071
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AA seq
544 aa
AA seq
DB search
MMDMEGVVTVGDLASLEPELLQLPELSPLALKANPSLADQLFSHWLSLPETSRLVRCLLT
NMKTGAPLNALESSNTSINAILSNSLPSMFVGSSTPPLSPRSSSVSPRIMKQRTGPSSLG
SPLKPVGEPVREAIPQFFFRNGRPPPSEMIEQCLFEINQQFYGHPDGLQEHEFKSITKGF
CKLPSFFSKTLFRKIDTDNTGTVTRDRFIDYWLRGNLLTMDLATRIYTVLKQRDCEYLTQ
DDFKPILRDLLASHPGLEFLQSTIEFQERYAETVTYRIFYYVNRSGSGRLTLKELRHGNL
IAAMQHVDEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFFIDKENLIRYGNHALTYRI
VDRIFSQIPRKFTSKVEGKMGYEDFVYFILAEEDKSSEPGLVYWFRCIDMDGNGVLTPNE
MQFFYEEQLHRMECLAQEPVLFEDILCQIFDMIGPENEGYITLRDMKNSKLSGNVFNILF
NLNKFIAFESRDPFLIRQERENPALTEWDRFAHREYIRLSMEDDGDDASNGSPDIWDESY
EAPF
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgatggatatggaaggtgtagtaacggtaggtgacttggcctctcttgaaccggaattg
ctacagttaccggaactgtcaccattggctctcaaggccaatccttctctcgctgatcag
ctcttttctcactggctttctcttcctgaaacttcccgtttggtgagatgtttgcttaca
aatatgaagacaggggcccccttgaatgccctcgagagttctaatactagcatcaatgca
attttgagcaattcattaccatccatgtttgttggtagcagcactccaccgctttcacca
cgtagctcatctgtttctccacgtattatgaaacagaggactggtccctcatctttaggt
tctccacttaaaccagttggtgaaccagtacgagaagccatacctcagtttttctttaga
aatggtcgtccacctccaagtgagatgatcgaacaatgcctatttgaaattaatcagcag
ttttatggtcatccagatgggctgcaagaacatgaatttaagtcgatcaccaagggcttc
tgcaaacttccttcttttttctccaaaacccttttcagaaagattgacactgacaacact
ggcactgtgacaagggatcggtttattgattattggttgagaggcaacttgttaactatg
gatttggcaaccagaatatatactgttctaaagcaacgagattgtgaataccttactcag
gatgatttcaaacctattttacgagatcttttggcatcccatccagggttggagtttttg
caaagcacaatagaatttcaagaacgatatgctgagacggtgacatacagaatattttac
tatgttaatagatcgggaagtggccgccttactctcaaggagttgagacatgggaaccta
attgctgccatgcagcatgtagatgaggaggaagacattaataaagttttaaggtacttt
tcttatgagcacttctacgtgatctactgcaaattttgggagcttgacaccgaccatgat
ttttttattgacaaagagaaccttattagatatggtaaccatgctcttacctaccggatt
gttgatagaatattttcccagataccaagaaaatttaccagcaaagttgaaggaaagatg
ggttatgaagattttgtttacttcatactggcagaggaggataaatcttctgaacctggg
ctagtgtattggttcagatgcattgatatggatgggaatggagtcctcacaccaaatgaa
atgcaattcttttatgaagagcaattgcatcggatggaatgcttggctcaagagccagtg
ctctttgaggatatcttgtgccagatttttgatatgattggaccagagaatgagggctac
atcacactgcgtgacatgaaaaattctaaactctctggaaatgttttcaacattcttttc
aacctcaataaattcattgcttttgaaagtcgtgatcctttcctcattcgtcaggaacgg
gaaaatccagctttgacagaatgggatcgctttgcacatagagaatacattaggctttct
atggaagatgatggtgacgatgcttcaaatggcagtccagatatatgggatgaatcttat
gaggcacccttttga
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