Ricinus communis (castor bean): 8264153
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Entry
8264153 CDS
T01087
Name
(RefSeq) probable starch synthase 4, chloroplastic/amyloplastic isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00500
Starch and sucrose metabolism
rcu01100
Metabolic pathways
rcu01110
Biosynthesis of secondary metabolites
Module
rcu_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
8264153
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rcu01003
]
8264153
Enzymes [BR:
rcu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
8264153
Glycosyltransferases [BR:
rcu01003
]
Polysaccharide
Storage polysaccharide
8264153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_trans_1_4
Glyco_transf_4
Glycos_transf_1
Glyco_trans_4_4
Dscam_C
Motif
Other DBs
NCBI-GeneID:
8264153
NCBI-ProteinID:
XP_025013205
LinkDB
All DBs
Position
5:complement(21051367..21059818)
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AA seq
1039 aa
AA seq
DB search
MATKPASWFLSQGYTVFNCNHNNHYHHNHNKQTNVRFFLPPHRLLPTSCKMRQRNLSSSQ
NKRQQVKKASPEIPPTGGDFESSSGDDIDDSEVALSSLDVKSVHYTSAKDEKSNTNAEHA
QLGDAKDLDNLTQEMKSLGIYGGEELSSIPDEIKSSGLKIDGGEQLSRVQLEDLIGMIRN
AEKNILLLNQARVNALEDLQRILAEKEILQGEINILEMRLAETDARMKVAAQEKIHVDLM
EDQLEKLRNELAYRSENQSRLLNEDVPLLQDTTLHSLSEELNSLREENTSLKNDIEALKL
ELSNVKDTDERVMARENERMLLESSLKDLESKLLASQEDVSKLSILKVECKDLWEKVETL
QALLDKATKQADQAILVLQQNQELRKKVDKLEESLEEANAYKLSSEKLQQYNEFMQQKMK
LLEERLQRSDEEINSYVSLYQESVQEFQDMLNIVKEESKKKALDEPVNDMPWEFWSHLLL
MIDGWLLEKKISADDAKMLRDMVQKRDRRIHDTYFECRQKNENEAISMFLKLTSSPSSPG
LHVIHIAAEMAPVAKVGGLGDVVAGLGKALQKRGHLVEIILPKYDCMQYNGIGNLRALDV
TVESYFDGKLYKNKIWVGTIEGLPVYFIEPHHPDKFFWRGQFYGEHDDFKRFSFFSRAAL
ELLHQSGKKPDIIHSHDWQTAFVAPLYWDLYAPKGLNSARICFTCHNFEYQGTAPASELA
SCGLDVHHLNRPDRMQDNLAHDRINPVKGAVVFSNIVTTVSPTYAQEVRTAEGGRGLHST
LNFHAKKFIGILNGIDTDSWNPATDTCLKVQYSANDLQAKAENKLATRRLLGLSTADARQ
PLVGCITRLVPQKGVHLIRHAIYRTVELGGQFILLGSSPVAHIQREFEGIANHFQNHEHV
RLILKYDDSLAHSIYAASDMFIIPSIFEPCGLTQMIAMRYGSIPIARKTGGLNDSVFDVD
DVTIPLQFQNGFTFLNPDEQGISGALERAFNYYRNNPEGWQKLVQKDMNIDFSWESSAAQ
YEELYSKSVARAKAAVNRT
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaaaccagcgtcgtggtttctaagccagggttacacagtttttaattgtaac
cataacaatcattatcatcataatcataataaacaaacaaatgtacgattctttttgcct
cctcatcgattgcttccaacttcttgcaaaatgcgacaacgtaatttgagtagctcgcag
aataagagacagcaagtgaaaaaagcttcacctgaaattcctcctactggtggtgatttt
gaatcgagcagtggtgatgatatagatgattcggaggttgcacttagtagtttagatgtg
aagagtgttcactatacgagcgcgaaagatgaaaaaagtaatactaatgcggaacatgcc
caacttggtgatgctaaagatttggataatcttactcaagaaatgaaatctttgggaata
tatggaggagaggagctttcaagtatccctgatgaaataaaatcttcgggattaaaaata
gatggtggagagcaactttcaagagttcaacttgaggatttgataggcatgataagaaat
gcagagaaaaatatcctgcttctcaatcaagctcgggttaatgcacttgaggatcttcaa
agaattctagctgagaaggaaatattgcaaggggaaattaatattttggaaatgagattg
gcagaaactgatgcgaggatgaaggttgctgcccaagaaaagatacatgtggacctcatg
gaagaccagttagagaaattaagaaatgaattggcttacaggagtgagaaccagagcaga
cttttgaatgaggatgtccctctgcttcaggacactactcttcattccctcagtgaggag
cttaattcattgcgggaagagaatacttcactgaaaaatgatatagaagcgcttaagttg
gagcttagtaatgttaaggatacagatgagcgtgttatggcacgagagaatgaacgtatg
ctattggagtcttctctcaaagacttggagtctaaactgttagcttctcaggaagatgtt
tcaaagctatcaatcctgaaagttgaatgcaaagacttgtgggaaaaggtggagacttta
caagcattactagacaaggcaacgaaacaagcagatcaggctattctagtgttacaacaa
aaccaggagctccggaagaaagttgataaattggaagagtccttggaagaagcaaatgcc
tataagctatcgtcagaaaaattgcagcaatataatgaattcatgcagcaaaagatgaag
ttattggaggaacgtcttcaaaggtctgatgaagaaataaattcttatgttagcttatat
caagaatctgtgcaagaatttcaagatatgcttaatattgtaaaagaagaaagcaagaaa
aaggcactagatgaacctgtaaatgatatgccgtgggaattttggagccatttattgctt
atgattgatggctggctgcttgaaaagaaaatatcagcagatgatgcaaagatgttacga
gatatggttcagaaaagagataggcgtattcatgacacatattttgagtgcagacaaaaa
aatgagaatgaagctatatctatgtttctcaagctgacatcatcaccaagcagtccagga
ttgcatgtcattcatattgcagcagagatggcaccagttgctaaggttggtggtttggga
gatgttgtggctggtcttggcaaagcactgcaaaagagaggacaccttgtggaaatcatt
ctgcctaaatatgattgcatgcaatataatggtattggtaacttaagggccctggatgtg
actgtggaatcatattttgatggcaaattatacaaaaacaaaatatgggttggcactatt
gaaggtcttcctgtttattttattgagcctcatcatcctgacaagttcttttggagaggg
caattttatggagagcatgatgatttcaaacgcttttcatttttcagccgtgctgcactt
gagttgcttcatcaatctggcaaaaaaccagacataatacactcccatgactggcagacg
gcttttgttgcacctctatattgggatctatatgcccccaaaggattaaattcagctaga
atatgttttacatgccacaactttgagtaccaagggactgcccctgcatcagaattggca
tcttgtggccttgatgtccatcatctaaatagaccagatagaatgcaggataatttggca
catgatagaatcaatcctgtcaagggtgcggtggtgttctcaaacattgtgacaacagta
tcgcccacctatgcacaagaggtgcggactgctgagggaggaaggggtctccattcaact
cttaattttcacgcgaagaagttcattggcattcttaatggaatcgatactgattcgtgg
aatcctgcgactgatacttgtctcaaagttcagtacagtgctaatgatcttcaggcgaag
gcagaaaacaaattagctacgagaaggcttcttgggctgtccactgcagatgctaggcag
ccattggtaggctgcataaccagattggtgccacagaaaggtgtacatcttattagacat
gcaatataccgaacagtggagttgggaggtcagtttatacttcttggctcaagtccagtt
gcacacattcagagggaatttgagggtatagcaaaccattttcagaatcatgagcatgtt
cggctgatattgaagtatgacgattctcttgcccattccatttatgcagcgtctgacatg
tttatcatcccatctatttttgagccttgtggcctgacacagatgatagctatgagatat
ggttccataccaattgcaagaaaaacaggtggtctaaatgacagcgtttttgatgttgat
gatgttacaattccactccagtttcaaaatgggtttacattcttgaatcctgatgaacag
ggtataagcggtgccttagaacgcgcatttaactactatagaaacaatcccgagggctgg
cagaagcttgtacagaaggatatgaatatagatttcagttgggaatcttcagcagcacag
tatgaggagctctactcaaagtcagtggccagagcaaaggcagcagtaaatcggacttaa
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