Ricinus communis (castor bean): 8264179
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Entry
8264179 CDS
T01087
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00900
Terpenoid backbone biosynthesis
rcu01100
Metabolic pathways
rcu01110
Biosynthesis of secondary metabolites
Module
rcu_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
8264179
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rcu01006
]
8264179
Enzymes [BR:
rcu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
8264179
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
8264179
2.5.1.29 geranylgeranyl diphosphate synthase
8264179
Prenyltransferases [BR:
rcu01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
8264179
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
8264179
NCBI-ProteinID:
XP_002525096
UniProt:
B9SGH7
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All DBs
Position
7:2027113..2028628
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AA seq
369 aa
AA seq
DB search
MSSVNLGSWVHTSSIFNQASRSRSKSFSSNPLKGLQIPVLCSKSRKPISFIAAIITKEEK
TLQEEQDNFNSRPPTFDFKSYMLQKAASINQALDAAVPIREPTKIHESMRYSLLAGGKRV
RPALCLAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGE
DVAVLAGDALLALAFEHIAIATLNVSPARIVRAVGELAKAIGAEGLVAGQVVDICSEGLS
EVGLEKLEFIHVHKTAKLLEGAVVLGAIMGGGTDEEVEKLRKYARDIGLLFQVVDDILDV
TKSSQELGKTAGKDLVADKVTYPKLMGIDKSREFAEKLNKEAQEQLAGFDPEKAAPLIAL
ANYIAYRQN
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgttaatttaggttcttgggtacatacctcttcaatcttcaaccaagcatcc
agatccagatccaaatctttttcttctaatcctctaaaaggcttgcagattcctgtttta
tgctcaaaatcaaggaagcccatttcttttattgcagcaattattacaaaagaagagaaa
actcttcaagaagaacaagataattttaattcaagaccacccacttttgatttcaagtct
tacatgctccaaaaagctgcttccatcaatcaagctttagatgctgctgttccgattcgt
gaaccaactaaaattcatgaatctatgaggtattctcttttggctggtggcaaaagggtc
agaccagcactttgtttagctgcttgtgaactggttggtggcaatgaatctatggctatg
cctgctgcatgtgctgtagaaatgattcatactatgtcacttattcatgatgatcttcct
tgtatggataatgatgatttacgccgtggaaagcccactaatcatattgtttttggtgag
gatgtggctgttcttgcaggtgatgcattattagcactcgcttttgaacatatcgctata
gccactttaaatgtttctcctgctagaattgttagagcagttggggaattagctaaagct
attggggctgaagggttagttgctggtcaagttgttgatatatgttctgaaggattatcg
gaagtgggcttagaaaaacttgaatttattcatgtccataagaccgcaaagttgctggaa
ggggctgtggtgttaggggctataatgggtggagggactgacgaggaagttgagaaactg
aggaaatatgctagggatattgggctgttgtttcaagtggtggatgatattcttgatgtc
accaaatcatctcaagagttggggaaaactgcagggaaggatttggtggcagataaggtt
acatatccgaagttgatgggaattgacaagtcgagggaatttgctgagaagttgaataag
gaagctcaagagcagttggctgggtttgatcctgagaaggctgctccattgattgctttg
gctaattacatagcttacaggcaaaactaa
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