KEGG   Ricinus communis (castor bean): 8264535
Entry
8264535           CDS       T01087                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
rcu  Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rcu03041]
    8264535
Spliceosome [BR:rcu03041]
 Complex B
  Other components
   Complex B specific factors
    8264535
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 EIF3I WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML LisH_TPL Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_NWD2_C Beta-prop_DCAF4 Ge1_WD40 Beta-prop_RIG_2nd Beta-prop_Nup120_160 WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_SPT8 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_VPS8 Beta-prop_LRRK2 DUF7165 Mala_s_1-like VPS8_N Beta-prop_IFT122_2nd Beta-prop_WDR75_2nd Beta-prop_IP5PC_F zf_topless WD40_like
Other DBs
NCBI-GeneID: 8264535
NCBI-ProteinID: XP_015584549
LinkDB
Position
1:complement(2852230..2868762)
AA seq 512 aa
MTLEIEARDVIKIVLQFCKENSLHQTFQTLQNECQVSLNTVDSIETFVADINSGRWDSIL
PQVSQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL
LVRTYFDPNEAYQDSTKEKRRSQIAQALAAEVSVVPPSRLMALIGQALKWQQHQGLLPPG
TQFDLFRGTAAMKQDVDDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSVDGFIEVW
DYLSGKLKKDLQYQADETFMMHDDPVLCVDFSRDSEMIASGSQDGKIKVWRIRTGQCLRR
LERAHSQGVTSVAFSRDGSQLLSTSFDSTARIHGLKSGKLLKEFRGHTSYVNDAIFTTDG
TRIITASSDCTVKVWDVKSTECIHTFRPPPPLRGGDASVNSIHLFPKNTDHIVVCNKTSA
ICIMTHQGQVVKSFSSGKREGGDFLAACVSPKGEWIYCVGEDRNIYCFSHQSGKLEHLMT
VHEKNVIGVTHHPHRNLIATYGEDCTMKLWKP
NT seq 1539 nt   +upstreamnt  +downstreamnt
atgacacttgaaattgaagctcgagatgtaataaagattgtgcttcaattctgcaaagag
aattcactgcaccaaacgtttcaaacattacagaatgagtgccaggtgtcgctaaataca
gtggatagcattgaaacgtttgttgctgatataaatagtggaagatgggattctatattg
cctcaagtttctcaacttaaacttccaaggaataagttagaggacttgtatgagcagatt
gtgctagaaatgatagaactccgagagctagacactgcacgtgccattttgcgacaaact
caagccatgggtgttatgaagcaggagcaacctgagagatatttacgacttgagcatctt
ctggttaggacttactttgatccgaacgaggcttaccaagattcaaccaaggaaaaacgc
cgttcacagattgcccaagctcttgctgcagaagttagtgtagttccaccttcacgatta
atggctttaattggtcaagctttaaagtggcagcagcaccaaggattgcttccgccagga
acacagtttgacttatttcgaggaacagctgctatgaaacaagatgtagatgacatgtat
ccaacgactctttcacacaccattaagtttggaactaaaagtcatgcagaatgtgctcga
ttttcaccggatgggcagttccttgtctcatgttctgttgatggatttattgaggtctgg
gattatctaagtggaaaactcaagaaagatcttcagtaccaggctgatgaaacttttatg
atgcatgatgatccagtcctatgtgttgattttagtcgagattctgagatgattgcctct
ggctctcaagatggaaagatcaaggtttggagaatcagaactggtcaatgcttgcgccgt
ctggaacgtgcgcattctcagggagtcactagtgttgcattttctcgggatggaagccag
ctgctaagtacatcctttgacagcacagccagaatacatggcctaaaatctgggaagttg
ttgaaagaattccgcggccatacatcttatgtgaatgatgccatctttactactgatgga
actcgtattattactgcctccagtgactgcacagtcaaggtttgggatgtgaagagcaca
gagtgtatacatactttcaggccgccgccaccattgaggggaggcgatgcttctgtgaat
tctattcatctgttcccaaaaaacacagatcacattgttgtctgtaataagacatcagca
atatgtatcatgacacatcaaggacaggttgtgaagagcttctcgtctggtaaaagagaa
ggtggagattttcttgcggcatgtgtatcacctaaaggagaatggatatattgtgttggt
gaagacagaaatatttactgcttcagccatcaatctgggaaactggagcatctgatgacg
gttcatgagaagaatgtaattggtgtgactcatcatccccataggaatctaattgctaca
tacggtgaagactgcacaatgaaattatggaagccttaa

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