Ricinus communis (castor bean): 8265048
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Entry
8265048 CDS
T01087
Name
(RefSeq) pyridoxal 5'-phosphate synthase subunit PDX1.3
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00750
Vitamin B6 metabolism
rcu01100
Metabolic pathways
rcu01240
Biosynthesis of cofactors
Module
rcu_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
8265048
Enzymes [BR:
rcu01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
8265048
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Motif
Pfam:
SOR_SNZ
ThiG
Dus
NMO
TetR_C_27
Motif
Other DBs
NCBI-GeneID:
8265048
NCBI-ProteinID:
XP_048236057
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Position
10:6059177..6062345
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AA seq
309 aa
AA seq
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MAGTGVVAVYGNGAITEAKKSPFSVKVGLAQMLRGGVIMDVINAEQARVAEEAGACAVMA
LERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEALGIDYVDES
EVLTLADEDNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNVVEAVRHV
RSVMGDIRVLRNMDDDEVFSFAKKIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALM
MQLGCDGVFVGSGVFKSGDPAKRARAIVQAVTHYTDPQLLADVSCGLGEAMVGINLNDSK
VERFANRSE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaccggcgtggtcgctgtttacggtaacggagcgataaccgaagccaaaaaa
tcccctttctccgtaaaagtggggctagcccagatgctacgtggcggcgtcataatggac
gtcatcaacgccgaacaagcccgcgtagccgaagaagccggcgcatgcgctgtcatggct
ttagaacgtgtcccagccgatattcgcgcgcaaggtggcgtggctcgcatgagcgacccg
cagctaataaaagaaataaaacaggcggtgaccatccccgtgatggccaaagcacgtatt
ggccatttcgtcgaagcacaaatcctcgaagctttaggtattgactacgtagacgaaagc
gaagtacttacgcttgcagacgaggataaccacatcaacaagcataacttccgtattccg
ttcgtgtgcggctgtcgcaacctcggcgaagcgttacggaggatacgtgaaggagctgca
atgataagaacgaaaggtgaggcagggacaggaaacgtggtagaagctgttagacacgtg
aggtctgtgatgggtgatattagggtgcttagaaatatggatgacgatgaagtttttagc
tttgctaaaaagattgctgctccttatgatttggttatgcagactaagcaactgggtagg
ttgcctgttgttcagtttgctgctggcggtgttgctactcccgctgatgctgctttgatg
atgcaattaggttgtgacggtgtgtttgttggttctggtgtgtttaagagtggggatccg
gctaagagggctagggccattgttcaagcggttacgcattatactgatcctcagttgctt
gctgacgtaagctgtggccttggtgaagctatggttggtattaatttgaatgatagcaag
gttgagaggtttgctaataggtctgagtaa
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