Ricinus communis (castor bean): 8265051
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Entry
8265051 CDS
T01087
Name
(RefSeq) eukaryotic translation initiation factor 5B isoform X1
KO
K03243
translation initiation factor 5B
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
rcu03012
]
8265051
Translation factors [BR:
rcu03012
]
Eukaryotic type
Initiation factors
eIF-5
8265051
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
Roc
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
8265051
NCBI-ProteinID:
XP_048225989
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Position
10:complement(6023405..6033532)
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AA seq
1341 aa
AA seq
DB search
MGRKKPTDENPQGGGGKSKKKQLAIDDDEYNIDTGLSEELNDKVSLTGKKKGKKGNQKSL
QPDEEKEDVEEDGEIQDLVFSGKKKSKGKKNGTASVFSASQFGLLRDEDNDNNDDEETSD
LLGDKNSEVEDEPVVSFTGKKKASKKPNKTSGSLFSAAAFDALDDDNEGEEIDKSEEGND
DYDMPVIEFTGKKKSSKGAKKVGSSVFTAATLHGLDDNEEVNGDEDEDDGAITFSGKKKS
SKKAGNKFSSALLEEENDEEASATVKISDDIAEAEDDDGAAITFTGKKKSSKKKGKVNDD
VAEQQTGVLEAKDKGEEVVETSKNKKKKKNKSGRTAQEEEDLDKILAELGEGLPTEKPSA
STPQEESNQVHLEQVPPENASGEKEGEEEKEESAAAKKKKKKKEKEKEKKAAAVAAAAAA
SQGKEEIVEQAKAETKEPKKSDAKGKAADKKVPKHVREMQEALARRKELEERKAREEEEK
RRKEEEERRRQEELERQAEEARRRKKEREKEKLLKKKQEGKLLTGKQKEEQRRLEAMRNQ
ILANAGITIPAADKEGAPTKRPKYHTKKSKPAANHHANDAAPVKLEENVEATEKEQEQQD
AEIEVEPVEMEKVAEEESINAEEKTEVRTEENGMEEDEDDEEWDAKSWDDVNLNVKGAFD
DEEIDSEPKKKEVKNAAPASRNADPPAAAKPAVAGQTPIPSQSVKSQDAAIKKPHPEVDD
SGKNRTKDAAAKNKTPPSDATPKESEENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGE
AGGITQQIGATYFPAENIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDI
AILVVDIMHGLEPQTIESLNLLRMRNTEFIVALNKMDRLYGWKVCRNAPIVKAMKQQSKD
VQNEFNRRLTGVITQFKEQGLNTELYYKNREMGETFSIVPTSAISGEGIPDLLLLLVQWT
QKTMVEKLTYSDEVQCTVLEVKVIEGHGTTIDVVLVNGVLHEGDQIVVCGFQGPIVTTIR
ALLTPHPMKELRVKGTYLHHKEIKAAQGIKISAQGLEHALAGTGLYVVGPDDNLEDIKEA
AMEDVRSVMNRIEKRDEGVYVQASTLGSLEALLEFLKSPAVGIPVSGIGIGPVHKKDVMK
ASVMLEKKKEYATILAFDVKVSQETRELADDLGVKIFMADIIYHLFDQFKAYIDNLKEEK
KKEAADEAVFPCVLKILPNCIFNKKDPIVLGVEVTDGIVKVGTPICVPDKDFIDIGRVAS
IENNYKAVDYAKKGQSVAIKLVNNSPEDQQKMYGRHFDHEDLLVSRISRTSIDVLKANYR
DDLSMDEWRLVVKLKNIFKIQ
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgaaagaagcctactgacgagaatcctcagggtggtggtgggaaatcaaagaaa
aagcaattggcgattgatgatgatgagtacaatattgatacagggctctctgaggagctg
aatgacaaggtttcacttactgggaagaagaaaggcaaaaaggggaaccaaaaaagctta
cagcctgatgaggaaaaggaagacgtggaagaggacggtgagattcaggatttagtcttt
tccggaaagaagaaatcaaaaggaaagaagaatggaactgctagtgtattttcagcatca
cagtttgggttacttagagatgaagataatgataacaatgatgatgaggagacctctgat
ttacttggtgataaaaatagtgaggtagaagacgaaccagttgtaagctttactgggaag
aaaaaagcatcaaagaaacctaacaagaccagtggtagtttgtttagtgctgcagctttt
gatgcacttgatgatgataatgaaggagaggagattgataaatctgaggagggtaatgat
gattatgatatgccagttattgagtttactgggaaaaagaagtcatccaagggtgcgaag
aaggttggtagttctgtgttcacagcagctactcttcatgggttagatgacaatgaagag
gtgaatggggatgaggatgaagacgatggagctataactttctcaggaaaaaagaagtca
tccaagaaggcaggcaataagttcagttcagcactgcttgaagaggaaaatgatgaagag
gcttctgcaactgttaaaattagtgatgatatagcagaagctgaggatgatgatggagcg
gctattacatttacaggtaaaaagaaatcatctaagaagaagggcaaagttaatgatgat
gtagcagagcaacagactggtgttcttgaagctaaggataagggtgaagaggtggtagaa
acttcaaagaacaagaaaaagaagaagaataagagtggaaggactgctcaagaagaggag
gatttggacaagattcttgcagagcttggtgaggggttacctactgaaaaaccctctgca
tctactccacaagaggagagcaatcaggtccatcttgaacaagttccaccagagaatgct
tcaggtgagaaggaaggtgaggaagaaaaagaagagtctgctgcagcgaagaagaagaaa
aagaaaaaggagaaggaaaaggagaagaaagctgctgcagtcgcggctgctgctgctgca
tcacaggggaaggaagaaatagtggagcaagcaaaagctgaaacaaaagaaccgaaaaag
agtgacgcaaaaggcaaagctgcagataagaaagtgccgaagcatgttagagagatgcaa
gaggcacttgctaggcgaaaagaattggaggagaggaaggctagggaagaagaggagaag
aggagaaaggaagaagaggaaaggcgtaggcaagaagaacttgagaggcaagcagaagaa
gctaggcgtaggaagaaggaaagggaaaaagagaaactcttgaagaagaaacaagaaggc
aaactcttaacaggaaagcagaaggaagaacaacgacggttagaggctatgaggaatcaa
atacttgctaatgctggtattactattcctgcagcagacaaagaaggtgcgccaacaaaa
agacccaagtaccacactaagaagtcaaagccagctgctaatcatcatgcaaatgatgct
gccccagttaagctggaggagaacgtagaagctacagaaaaagagcaagaacaacaagat
gccgagattgaggtagagcctgtggagatggagaaggttgcagaagaggaatctataaat
gcggaagagaaaacagaagttagaacagaggagaatgggatggaggaagatgaggatgat
gaggagtgggatgcaaagagctgggatgatgttaatcttaatgttaagggtgcatttgat
gatgaggagattgattctgagcccaaaaagaaagaggtaaagaatgctgctccggcttct
cgcaatgcagaccctcctgcagctgccaagcctgctgttgcaggccaaacacctattcct
tcacagtcagttaaatctcaggatgctgcaattaagaaacctcatcccgaggttgatgat
agtggaaaaaataggacaaaagatgctgctgcaaaaaataaaacgccaccttcagatgcc
actcctaaagaaagtgaagaaaacctccgctctccaatatgttgtataatgggccatgtt
gatactggtaaaaccaaactgctagactgtatccgaggcactaatgtccaggaaggtgag
gctgggggtattacacagcagattggtgcaacatactttccagctgagaacataagagag
agaaccaaagaattgaaagccgatgcaaaactaaaggtcccaggtctactggttattgat
acacctggccacgagtcatttactaatttaaggtccaggggctcaggtttgtgtgacatt
gcgatcttggttgtggacattatgcatggcttggagccacagacaatagaatcactaaat
ctcttgaggatgaggaatacagaatttattgttgcattgaataagatggacagactctat
ggatggaaagtttgtcgcaatgcaccgatagtgaaagcaatgaagcaacagtctaaagac
gtgcaaaatgaattcaataggaggcttacaggggttataactcagttcaaggagcagggg
ctgaatactgagctgtactataaaaatagagaaatgggagaaactttcagtattgtccct
actagtgctattagtggagaaggcattcctgatttattattgttattagttcagtggact
cagaaaacaatggttgagaaacttacatatagtgatgaagtgcagtgtacagtgttggag
gttaaggttattgaaggtcatggaacaacaattgatgttgtgttagttaatggtgtgctt
catgaaggagatcaaattgtcgtttgtggttttcaggggcctattgttaccaccattcga
gctctgttgacacctcacccaatgaaggaacttcgagttaaggggacatatctacaccac
aaagaaattaaggctgcgcagggtatcaagatcagtgcacagggccttgagcatgctctt
gctggcacaggtctatatgtcgtaggaccagatgataatttggaggatatcaaggaagca
gcaatggaagacgtcagatcggtgatgaaccggattgaaaagagggatgagggagtctat
gtccaagcatctaccctagggtcattggaagcattgctggaatttttaaagtcaccagct
gtaggcattcctgttagtggcataggcataggcccagtacacaaaaaggacgttatgaag
gccagtgtaatgcttgagaagaaaaaggagtatgccactatcttggcttttgatgttaaa
gtgtctcaagagactcgggaacttgcagatgatctgggtgtgaagattttcatggctgac
atcatttatcacctattcgatcaattcaaggcttatattgacaacttgaaggaggaaaag
aagaaagaagctgcagacgaggcagtgttcccttgcgttcttaagattttacctaattgc
attttcaacaagaaagatccaattgtcttgggagttgaagttactgatggcatagtcaag
gttgggactccaatttgtgttcctgacaaagattttattgacattggccgtgttgcttcc
attgaaaataactataaggctgttgattatgccaagaaaggccagagtgtggcaattaag
cttgttaataacagtcctgaggaccagcagaaaatgtatggcaggcattttgatcatgaa
gatttacttgtcagtcgtatttcaaggacatcaattgatgttcttaaagctaattaccgg
gatgatctgtcaatggacgaatggaggctggttgtcaagctgaagaacattttcaagata
cagtaa
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