KEGG   Ricinus communis (castor bean): 8265108
Entry
8265108           CDS       T01087                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 32 homolog 2
  KO
K12194  charged multivesicular body protein 4A/B
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03250  Viral life cycle - HIV-1
rcu03272  Virion - Hepatitis viruses
rcu04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    8265108
   03272 Virion - Hepatitis viruses
    8265108
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    8265108
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rcu04131]
    8265108
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rcu04147]
    8265108
Membrane trafficking [BR:rcu04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    8265108
Exosome [BR:rcu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   8265108
  Exosomal proteins of other body fluids (saliva and urine)
   8265108
  Exosomal proteins of colorectal cancer cells
   8265108
SSDB
Motif
Pfam: Snf7 TraF_2 APC_u9 MACPF_D2
Other DBs
NCBI-GeneID: 8265108
NCBI-ProteinID: XP_002514179
UniProt: B9RKD5
LinkDB
Position
3:complement(27952672..27955404)
AA seq 218 aa
MFNRLFGKPKQETNALTTLDKLNETLEMLEKKEKVLSKKAIAEVERAKEFTRTKNKRAAI
QCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGAAAMKAMQKATNID
DVDKTMDEINEQTENMKQIQEALSTPIGAAADFDEDELEAELEELEGAELEEQLLQPATT
APAAPVQVPAGRQPNRPAAQKQTAEEDELAALQAEMAL
NT seq 657 nt   +upstreamnt  +downstreamnt
atgtttaaccggctttttggaaaaccaaaacaggaaactaatgctctaactacgttagac
aaattaaatgagacacttgagatgttagagaaaaaagagaaagtactttcaaaaaaagct
attgcagaagttgaaagggcaaaagaatttactcgaacaaagaacaaaagagctgctatt
caatgtctgaagaggaaaaggctatatgaacaacaaatagaacagcttggaaatttccaa
ctccgtattcatgatcaaatgataatgttagaaggtgcaaaagccactacagaaactgta
gatgcattgagaactggagccgctgcaatgaaggcaatgcagaaagcaacgaatattgac
gatgtggataagacgatggatgaaatcaatgagcagactgagaacatgaaacaaattcaa
gaggctctttcaactcctattggtgctgcagctgattttgatgaggacgaattggaggca
gaacttgaagaattggaaggtgctgaactggaagaacaacttcttcaacctgcaaccaca
gctccagcagctccagtgcaggttccagcaggccggcaaccaaatcgtcctgctgctcag
aaacagacagctgaggaagatgaacttgctgcattgcaggctgagatggcactttga

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