Ricinus communis (castor bean): 8265210
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Entry
8265210 CDS
T01087
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 18
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rcu01002
]
8265210
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcu04121
]
8265210
Enzymes [BR:
rcu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
8265210
Peptidases and inhibitors [BR:
rcu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
8265210
Ubiquitin system [BR:
rcu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
8265210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
8265210
NCBI-ProteinID:
XP_002515370
UniProt:
B9RNQ1
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All DBs
Position
3:32833474..32839683
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AA seq
632 aa
AA seq
DB search
MHVGGITVDLNWFLQFVFTLFLIALGLLHLVKNTASKYFEVDAHFEGGATITADRNQAPA
VPSMESSCANCGNLGTKKCSRCKSVRYCSTECQEVHWKSGHKSKCKNLVRVNSVENAKTN
FGVKASGLGGRISSGIALVPSNGITKLIKKPTEVLFPYDKFIKLYNWNKGAFPPCGLLNC
GNSCFANVVLQCLTFTRPLVAYLLEEGHQRECRRNDWCFLCEFQVHVERASKSSHPFSPM
SILSRLPNIGGNLGYGKQEDAHEFMRFAIDTMQSVCLDEYGGEKAVDPAFQETTLIQHIF
GGHLQSQVICTKCNKISNQLENMMDLTVEIHGDSGSLEDCLEQFTDREQLHGENMYRCDG
CNDYVKAWKRLTIRRAPNILTIALKRFQSGRFGKLNKRVAFPESLDLSPYTSEGGDGTDV
YRLYAVVVHVDMLNASFFGHYICYIKDFCGNWYRVDDCKVRSVELEEVLSQGAYMLLYSR
ISARPSCLRTVEPAKELQPTENVGLGSCTNVKIECTNGRVECFSGVESINNTSATESLAS
ERNSGIVDDCDVELSSAVPMDMDITRTSDLLEASDCDNDTSVTFDYDAAGEDTVRIITID
SDLDSGVPVECGKDSSSVNGCCERRIGECGSD
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtcggcggaataacggtggatctcaattggttccttcaatttgtatttacgtta
tttttaatagctctaggattgcttcacttggtcaagaacacggcgtcgaagtacttcgag
gtcgacgcccatttcgaaggcggagctacgattactgctgatcggaatcaagccccggcg
gttccgtccatggaatcttcttgtgctaattgcggtaatcttggaaccaagaaatgctcc
cgttgtaaatctgttagatactgctcaacagaatgccaagaagtacactggaaatctggg
cataagtcaaaatgcaagaatcttgtcagggttaattcagttgagaatgcaaaaacaaat
tttggagttaaagcttcaggccttggaggcagaatttcttctggcattgcgctggttcct
tccaatggaatcactaagcttattaagaagccaacagaggttctgttcccctatgataag
ttcattaaactttacaactggaacaagggagcattccctccttgtgggctcttaaattgt
ggaaacagctgttttgccaatgtggtactgcaatgtctcacattcacacggccacttgtt
gcttacttgttggaggaaggccaccaaagagaatgtagacgcaatgattggtgctttctc
tgtgaatttcaagtgcatgttgaaagagcaagcaaaagttcgcatccattttcaccaatg
agtatactgtctcggttgcctaatattggcggtaatcttggctatgggaaacaggaggat
gcccatgagtttatgaggttcgcgattgatactatgcaatcagtgtgccttgatgaatat
ggtggagaaaaggctgttgatccagcctttcaagaaacgacccttattcaacatatattt
ggtggtcacctacaatctcaggtgatatgtacgaaatgcaacaagatatctaatcagctt
gaaaatatgatggatttaactgttgaaattcatggggattcgggttccttggaggattgc
cttgagcaattcacagacagagagcagcttcatggagaaaatatgtacagatgtgatggg
tgcaatgactatgtaaaagcttggaagcgtcttaccattcgacgggctccaaatattctt
acaattgccttgaaaagatttcagagtgggaggtttgggaaactcaacaaaagagtagct
ttccctgagagtttagatctcagcccctatactagtgaaggaggagatggtacagacgta
tacaggctttatgctgttgttgtccatgtggatatgctgaatgcctcattttttggtcat
tacatctgctatattaaggatttctgtgggaactggtatagagttgatgactgtaaggtt
cgaagtgttgaattggaagaagtactttctcagggagcatatatgcttttatatagcagg
atttctgccaggccatcatgtcttagaaccgtggaacctgcaaaggagctgcagccaaca
gaaaatgtaggtttaggctcctgcacaaatgtaaaaattgaatgtacaaacggaagagtt
gaatgcttctctggtgtagaatcaatcaataacacaagtgctactgagtccctagcatct
gaaaggaattcaggaattgttgatgattgcgatgttgaattaagttcagctgttccaatg
gacatggatattactcgcacgtcagatctactggaggcctctgattgtgacaatgacaca
tcagtaacatttgattatgatgctgcaggtgaagatacagtaaggattatcacaattgat
tctgatttggattcaggtgttccagtggaatgtgggaaggattcatcttctgtaaatggc
tgttgtgaaagaagaattggggaatgcggatctgattaa
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