Ricinus communis (castor bean): 8265361
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Entry
8265361 CDS
T01087
Name
(RefSeq) uncharacterized protein LOC8265361 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8265361
Membrane trafficking [BR:
rcu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
8265361
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
8265361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC4_WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WDR55
Synaptobrevin
Beta-prop_HPS5
B_lectin
Motif
Other DBs
NCBI-GeneID:
8265361
NCBI-ProteinID:
XP_048231625
LinkDB
All DBs
Position
6:21827899..21839319
Genome browser
AA seq
1115 aa
AA seq
DB search
MLAKLFHKNTAQQPPPPPPLPEAMEDNLGRGKLRGEDINPAVAVHYGIPSTASVLAFDPI
QSLLAIGTLDGRIKVIGGDNIEGLLVSPRQLPFKNLEFLQNQGFLASITAENEIQVWDLE
QRRLASTLRWESCITAFSVIYGSNYMYVGDEYGMVSVLKYDAEEVKLIQLPYYVPTDAIA
EASGLSSPNHHSVVGLLPQPASQGNRLLIAYDDGLIILWDVSEDKVILTKGNKDLQLKSK
TVAGFHKGVGHELTDDISLYEHADKEISALCWASRNGSVLALGYVDGDIMFWNLSTAAYA
KSEKSSNDVVKLQLSSADRRLPVIVLHWSADSSQNGCQGRLFVYGGDAIGSEEVLTILSI
DWSAGIENVKCIGRVDLTLNGTFSDIVLLQSDGVSKNKGTLILTNPGQLHFYNDASFASL
SSQQQEQNYVPSMQYPMVIPIVEPYMTVGKLGLVYRDGKFSKAFSKTVSAAKLQAAHARR
SMNWPLTGGVPSQPHDAENYQVERVYIAGYQDGSVRIWDATNPTFALLYVLGPEVKGIEI
AGTSASISALEFCSFTLSLAVGNELGMVHLYKLIGSTNEMSLHLVKETGKEVHTLQQGDG
PQCVAVFSFFNSPICNLQFANYGSRLAVGFHCGKVAMLDIITFSVLYLTNSVSNSESPVK
SLAVKSFSDTLSSISNPEFIESKIKSDPGKSELIIVTKDAHVVVVDDNSGSIISSQSVLS
EKESNVISMHIIEGGNLVSDMSSEKHSRNSTQNSETNSEPDQGLIHCALKVDHETSSETS
YYRQRIENFYLLLCFEDELQLYSLKSLNEGDINPIRKVNLLNTCCWTTTFKKDDKECGLI
VLYQTGVIEIRSLSDLEVVGESSLMSILRWNFKTNMEKTVCSSDTAEFMLVNACEFAFVS
LLTCGNNFRIPKSLPCLHDKVLAAAADGAMSSSPSQKEQVGPSGILGGFIKGLQVGKLEH
GMDISEVCDNNLAHLESIFSNPPFLKPSLDISDKQKVLELNIDDIVIDEPLVVSSSSLTN
KKDKKDKGAEKERLFEGSTIDSKPRLRTAEEIKAKYRKEDPAAAAAQARDKLAERGEKLE
RLSQRTEELQSGAENFASMASELAKQMEKRKWWNL
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgctagccaagctctttcacaagaataccgctcagcaaccgccgccaccgccaccacta
cctgaggctatggaggataatttgggaagagggaaattgagaggtgaagatataaatcca
gcggtggctgttcactatggaattccttctactgcttcagttttggcttttgatccgatt
caaagcctattggctattggaactttggatggtaggataaaagtgattggcggtgataac
attgaagggcttcttgtttctcctaggcaattgccttttaagaacttggagttcctacaa
aatcagggttttctagccagtatcacagctgaaaatgagattcaggtgtgggatttggag
caaaggagactagcttccactttacgatgggaatcctgcataactgcattttctgtcatt
tatggctcaaattacatgtatgttggggatgaatatggaatggtgtctgtgttaaaatat
gatgccgaggaagtaaaactgatacagcttccatattatgttccaacagatgcaatagct
gaggcatccgggctgtcctcacctaatcatcactctgttgttggacttctccctcaacct
gcatctcaaggaaatagactgttgattgcatatgatgatggattgattattctctgggat
gtttctgaagataaagtcattctaactaaaggcaataaagatcttcaattgaagagcaaa
acagtggctggctttcataaaggcgtgggacatgagcttactgatgatatatcattatat
gaacatgcggacaaagaaataagtgctctctgttgggcatctagaaatggatcagttctt
gctcttggttatgttgatggagatataatgttctggaacctatcaactgctgcttatgcc
aagtctgaaaaatcatcaaatgatgttgttaagctgcaattatcctctgcggacagaaga
ctcccggtgattgttttgcattggtctgcagacagttcacagaatggttgccagggtcga
ctctttgtttatggtggagatgcaattgggtctgaagaagtcctaacgattttgagcatt
gattggtctgctgggatagaaaatgttaagtgcattggacgtgtagaccttaccctcaat
ggcactttttctgatattgttttattacaaagtgatggtgtgagcaaaaataaaggcact
ttaatattgacaaaccctggacagctacatttttataatgatgcttcctttgcttccttg
tcatcccagcaacaggaacaaaattatgttccttctatgcagtatcctatggtcatacca
attgttgaaccatacatgactgtgggaaagctgggtttggtatatagagatgggaagttc
tcaaaggctttttctaagacagtatctgctgcaaaactccaggcagcacatgcacgaaga
agcatgaattggcctttgactggtggggttcctagccaacctcatgatgctgaaaattat
caggttgagagagtatatatagcaggttaccaagatggatctgttagaatatgggatgcc
acaaatccaacgtttgcacttctttatgttttaggacctgaggtgaaaggtatcgagatt
gcaggtacaagtgcatcaatatctgcattggaattttgctcgttcactttaagtttagct
gttggcaatgaacttggtatggttcatctatataaactaattgggagtacaaatgaaatg
agtttgcacttggtcaaagaaactggaaaagaagtccacactttgcaacaaggggatgga
cctcaatgtgtagctgtcttttcattcttcaattctccgatttgcaatttacaatttgcg
aactatggttccagacttgccgtaggatttcattgtggcaaggtagcaatgcttgatata
atcacgttttcggtgttatatcttaccaacagtgtctccaactcagagtcacctgtcaag
tctctggctgtaaaatcattttcagatactcttagctcaataagtaatccagagtttatc
gagtccaaaatcaagtcagatcctggaaagtcagaattgatcattgtgacaaaagatgca
catgttgttgttgtagatgacaactctggtagcataatcagctctcaatcagtactatct
gaaaaggaatcaaatgtaatttctatgcatatcatagagggtggcaatttagtctctgat
atgtccagtgaaaaacattcacgcaactccactcagaacagtgaaactaatagtgaacct
gatcaaggtctcattcactgtgcacttaaagttgatcatgaaacctctagcgaaacttcc
tattacaggcaaagaatagagaatttttatcttctgctctgttttgaggatgaattacag
ttatactctttgaaatctctgaatgagggtgatattaatcctattcggaaggtgaacctt
ttgaatacatgctgttggactacaactttcaagaaagatgataaagagtgtgggcttatt
gtcctatatcagactggagtgattgaaataaggtctttgtcagatcttgaagtggtggga
gaaagctctttaatgtcaattttgaggtggaactttaaaactaacatggagaaaactgta
tgctcatctgatactgcagagtttatgctggtaaatgcgtgtgaatttgcttttgtttct
cttttgacctgcgggaataacttcaggattccaaaatcattgccttgccttcacgacaaa
gtccttgcagctgctgctgatggtgctatgagttcatctcccagtcagaaggaacaggtt
ggtccttctggtattttaggtggtttcatcaagggcctgcaagtgggtaagctagagcat
ggcatggatatttctgaagtttgtgataataacttggctcatttagagagcatattttct
aatcccccgtttttaaagccttccctggacatctcagataagcaaaaagttttggagctg
aacatagatgacattgttattgatgaacctcttgttgtctcatcttcatcattgacgaat
aagaaagataaaaaagataaaggagctgaaaaagaaagattatttgagggatcaactatt
gattcaaagccaagacttagaacagctgaagaaattaaggccaagtataggaaggaggat
cctgctgctgctgctgcacaggccagggacaaacttgcagaacgtggtgaaaaacttgag
aggctaagccagcgaaccgaggagctgcaaagtggggctgaaaactttgcatcaatggca
agcgaacttgccaaacaaatggaaaaacgcaagtggtggaacctatga
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