KEGG   Ricinus communis (castor bean): 8265440
Entry
8265440           CDS       T01087                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03030  DNA replication
rcu03410  Base excision repair
rcu03420  Nucleotide excision repair
rcu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    8265440
   03410 Base excision repair
    8265440
   03420 Nucleotide excision repair
    8265440
   03430 Mismatch repair
    8265440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rcu03032]
    8265440
   03036 Chromosome and associated proteins [BR:rcu03036]
    8265440
   03400 DNA repair and recombination proteins [BR:rcu03400]
    8265440
DNA replication proteins [BR:rcu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    8265440
  DNA Replication Termination Factors
   ELG1-RFC complex
    8265440
Chromosome and associated proteins [BR:rcu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    8265440
DNA repair and recombination proteins [BR:rcu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     8265440
  Check point factors
   HRAD17(Rad24)-RFC complex
    8265440
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_22 AAA_16 Mg_chelatase Rad17 Viral_helicase1 nSTAND3 AAA_11 RCF1-5-like_lid RuvB_N AAA_24 AAA_5 AAA_28 AAA_assoc_2 AAA_19 AAA_30 AAA_25 MeaB DNAX_ATPase_lid RNA_helicase ABC_tran AAA_18 bpMoxR KTI12 AAA_3 DNA_pol3_gamma3 IstB_IS21 NTPase_1 AAA_7 SLFN-g3_helicase T2SSE NPHP3_N DNA_pol3_delta_C DO-GTPase1 cobW AAA_29
Other DBs
NCBI-GeneID: 8265440
NCBI-ProteinID: XP_002509739
UniProt: B9RC55
LinkDB
Position
5:complement(24967705..24970243)
AA seq 333 aa
MATSSSSSATQNYDVPWVEKYRPSKICDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTG
KTTSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKVVILD
EADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGR
LIIVVQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPL
HVKNMVRHVMEGKYDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETG
FAHMRICDGVGSYLQLCGLLAKLALVRDTARAA
NT seq 1002 nt   +upstreamnt  +downstreamnt
atggcaacatcatcttcttcatcggccactcaaaactacgacgttccatgggtagagaaa
tatagaccgtccaaaatctgcgacattgtcgggaacgaagatgccgtctcccgcctccaa
gtcatcgcacgggatggcaacatgcctaacctaatcctatccggtcctcctggaactggt
aaaactacaagtatactagctcttgcacatgagcttttaggacctaattataaggaggct
gttctggagctaaatgcttctgatgataggggtatagatgttgtgaggaacaaaatcaaa
atgtttgcacaaaagaaagtgactttacctcctggaagacacaaagtcgtaattcttgat
gaggctgatagcatgacatctggagcgcaacaagctttgaggaggacaatggaaatatat
tcaaattctacacgttttgctcttgcttgcaatacttcttctaaaattattgagcctatt
cagagtagatgtgcgcttgttcgattttcaagattatctgatcaagaaattcttggtcgt
ctcatcattgttgttcaagcggaaaaggttccatatgttcctgagggccttgaagctatc
atattcactgctgatggagatatgaggcaggcattgaataacttgcaagctacgtatagt
ggatttcggtttgtcaaccaggaaaatgttttcaaggtttgtgaccagcctcatccattg
catgtaaagaacatggttcgccatgtgatggagggaaagtatgatgatgcttgttctggt
ctgaagcagctttatgacttgggctattcccctactgacataatcacaacccttttccgt
attataaagaattatgatatggcggaatatctgaaattggaattcatgaaggaaactgga
tttgcccatatgagaatctgtgatggggtaggttcctatcttcagctatgtggcctttta
gctaagcttgcgctagttcgtgacacagccagagcagcataa

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