Ricinus communis (castor bean): 8265476
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Entry
8265476 CDS
T01087
Name
(RefSeq) cellulose synthase-like protein D5
KO
K00770
1,4-beta-D-xylan synthase [EC:
2.4.2.24
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00520
Amino sugar and nucleotide sugar metabolism
rcu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
8265476
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rcu01003
]
8265476
Enzymes [BR:
rcu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.24 1,4-beta-D-xylan synthase
8265476
Glycosyltransferases [BR:
rcu01003
]
Polysaccharide
Structural polysaccharide
8265476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
Glyco_tranf_2_3
Baculo_IE-1
zf-UDP
S6OS1
Xin
Motif
Other DBs
NCBI-GeneID:
8265476
NCBI-ProteinID:
XP_002523143
UniProt:
B9SAX4
LinkDB
All DBs
Position
1:8201093..8205623
Genome browser
AA seq
1162 aa
AA seq
DB search
MVKTANSPSSSPVTITVSSGGKERGSRSMGLTSPVPRASISNNPNSPLTNSKNRTSSGGR
YCSMSRDDTTEEINSDFVTYTVHIPPTPDHQPMSVSQSSLDIKNDGKPDRSFISGTIFTG
GFNSVTRGHVMDCSMEMTKSLKSGLVCGMKGCDEKAIRGKCECGFKICRDCYLDCVGANA
VGHCPGCKEPYKDVDDEDFDDEEDDDEAKSEEEDQALPLPKLDKRLSLVKSIKAMNHPPE
FDHTRWLFETKGTYGYGNAVWPKDGYGGGSGANEFEHPPDFGERSRRPLTRKVGVSAAIL
SPYRLLIAMRLAALGLFLTWRIRHPNREAMWLWGMSITCEVWFALSWLLDQLPKLCPVNR
VTDLSVLKQRFESPNLRNPKGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVE
KVACYLSDDGGSLLTFEALAETASFARTWIPFCRKHNIEPRNPEAYFGQKRDFLKNKVRL
DFVRERRRVKREYDEFKVRINSLPESIRRRSDAYNAHEELRAKKKQVEMGGSLSEPLKVP
KATWMSDGSHWPGTWTSGESDHSRGDHAGIIQAMLAPPNSEPAFGAEADAENLIDTMEVD
IRLPMLVYVSREKRPGYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYIYNSLALREG
MCFMLDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVSMRALDGLQGPMYVGTGCIF
RRTALYGFSPPRTTEHHGWFGRKKIKLFLRKPKTTKKQEDEIALPINCDQNDDDADIESL
LLPKRFGNSTSLAASIPIAEYQGRLLQDVQGRGNHGRPAGSLAVPREPLDAATVAEAISV
ISCFYEDKTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDR
LHQVLRWATGSVEIFFSRNNALFASPRMKFLQRVAYFNVGMYPFTSMFLIVYCILPAVSL
FSGQFIVQSLSVTFLVFLLAITMTLCLLALLEIKWSGITLHDWWRNEQFWLIGGTSAHPA
AVLQGLLKVIAGVDISFTLTSKSAMPEDGDDEFAELYVVKWSFLMIPPITIMMLNMIAIA
VGVARTVYSTYPQWSKLLGGVFFSFWVLSHLYPFAKGLMGRRGRVPTIVYVWSGLLSIII
SLLWVYISPPSGKQDYMKFQFP
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaacggctaattctccatcttcttctccggtgacgataacggtatcatcagga
ggcaaagaaagaggaagtagaagcatgggtttgacaagtccagtaccaagagcttctata
tcaaataacccaaattctccactcactaacagtaaaaaccggacctcgagtgggggtaga
tattgttcaatgtctagagatgataccactgaagagatcaactcagattttgtcacttac
acagttcacatacctcctactccagatcaccagcctatgtctgtctcacaatccagtcta
gatatcaagaatgacggaaagcctgataggagttttatttcgggtactattttcactggt
ggttttaattcagtcacgcgtggtcatgttatggactgctcaatggaaatgactaagtca
ctcaaatcagggcttgtttgtggaatgaaaggctgtgatgagaaagcaattcgaggaaaa
tgtgaatgtggattcaagatttgtagagattgttacttagattgtgttggggctaatgca
gtgggacattgtcctggctgcaaagagccatataaagatgttgatgatgaggattttgat
gatgaagaagatgatgatgaggctaaaagtgaagaagaagatcaggcgttgccattgcct
aagttggacaagagactttcacttgtgaagtcaattaaggcaatgaatcatcctcctgag
tttgatcatacaaggtggttgtttgagactaaaggaacttatgggtatggtaatgctgtg
tggcctaaagatggatatggaggtggatcgggagctaatgaattcgagcaccctccagat
tttggagagagatctagaaggcctttgactaggaaagttggggtttctgctgcaattctt
agcccttacagactactcattgcaatgcgtctcgcggcccttggtttgtttcttacatgg
agaattcgtcaccccaatcgcgaggcaatgtggctgtgggggatgtccataacttgtgag
gtctggtttgcattatcatggcttcttgatcagcttcctaagctctgccctgtaaacaga
gtgactgacctctctgtgctcaaacaacgtttcgaatctcccaatcttcgaaacccaaaa
ggccgttcagaccttccgggaattgatgtgtttgtttcaacagcagatcctgagaaagaa
ccacctcttgtcactgcaaatacaattctttcaatccttgcagttgattatccagtggaa
aaggtcgcttgttacttatcagatgatggtggttctcttttgacatttgaagctctagca
gaaactgctagttttgcaagaacttggattcctttctgcagaaaacacaacattgaaccc
aggaatcctgaggcttattttgggcagaagcgcgattttcttaaaaataaagtgaggctt
gacttcgtcagagagaggagaagagtgaagagagaatatgatgaatttaaggtgaggatc
aattcattgcctgaatcaattaggagaagatcagatgcttataatgcccatgaagagctg
cgggcgaagaagaaacaagtggaaatgggaggcagtctatcagaacctcttaaagtacca
aaggcaacttggatgtcagatggttctcactggccggggacttggacttctggagagagt
gaccactcaagaggagaccacgctggcataattcaggcaatgctagctccaccaaattca
gaaccagcttttggggcagaagcagatgcagagaacttaattgacacaatggaagttgat
attagattgccaatgctggtctatgtgtctcgtgagaaaaggccaggctatgatcacaac
aagaaagctggagctatgaatgctctagttagaactagcgcaatcatgtccaatggtcca
ttcatactaaatcttgattgtgatcactacatttataattctttggctttaagagaggga
atgtgctttatgcttgatagaggtggtgataggatctgttatgttcaattcccacaaagg
tttgaaggtattgatccaagtgatcgatatgcaaaccacaacacggtgttctttgatgtg
agcatgagagctcttgacggattacagggtccaatgtatgtaggaacaggctgcattttt
cgcagaacagctctgtatggattcagtccacctaggacaacagaacaccatggatggttt
ggcagaaagaaaattaagttgttcttgaggaaacccaagacgacaaagaaacaagaggat
gagatagcattgcctatcaactgtgatcagaatgatgatgatgcagatattgagtctttg
cttctaccgaaaaggtttgggaactcaacttctctggctgcgtctattccaattgcagaa
taccagggaaggttacttcaagatgtacaaggaaggggtaatcacggaagaccagccggt
tcacttgctgtacctagggagcctttggatgctgcaactgttgctgaggcaattagtgtt
atctcttgcttctatgaggataaaacggagtggggaaaaagggtgggttggatatatggt
tctgtgacagaagatgtggtgactggttatcgtatgcacaatcgaggatggaggtctgtc
tattgtgtaacaaaaagggatgcattccgcggcacagctccaatcaatctaacagacagg
ctgcaccaagtccttcgatgggctactggctcggttgaaatatttttctcaaggaataat
gcgctctttgctagtcctcggatgaaattcttgcagagagtggcatatttcaatgtagga
atgtacccttttacctctatgtttctcattgtttattgcatcctacctgcagtttctcta
ttctccggccagttcatcgttcaatctctcagtgttacctttctagtgttcttgttagcc
atcacaatgaccctatgcttgcttgcgctcctggaaattaaatggtcaggaatcactctc
catgactggtggcgaaatgaacagttttggctgattgggggaacaagtgctcatcctgca
gcagtattacaaggattactgaaggttatagcaggggttgatatttcattcacgttaaca
tctaaatctgccatgcctgaggacggagatgatgagtttgctgagctatatgtggtcaag
tggagcttcttgatgatacctccaatcaccataatgatgttgaacatgattgcaattgca
gtgggagtagcaaggactgtgtatagtacttatccacagtggagcaaacttcttggaggg
gtgttcttcagcttctgggttttgtctcatctctacccctttgcgaaaggcttgatggga
agaagagggagggtcccaaccattgtgtatgtctggtcaggattgctatccatcatcatt
tcattgctatgggtgtacattagtcctccttccgggaagcaagattacatgaagtttcag
ttcccctga
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