Ricinus communis (castor bean): 8265619
Help
Entry
8265619 CDS
T01087
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03013
Nucleocytoplasmic transport
rcu03015
mRNA surveillance pathway
rcu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8265619
09122 Translation
03013 Nucleocytoplasmic transport
8265619
03015 mRNA surveillance pathway
8265619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8265619
03041 Spliceosome [BR:
rcu03041
]
8265619
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
8265619
Spliceosome [BR:
rcu03041
]
Complex C
Other components
EJC/TREX
8265619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Bactofilin
Motif
Other DBs
NCBI-GeneID:
8265619
NCBI-ProteinID:
XP_048232332
LinkDB
All DBs
Position
7:7498607..7504928
Genome browser
AA seq
756 aa
AA seq
DB search
MSSKYPILENRPIDQWKVTELKEELKRRKLTTKGLKDDLIKRLDEALRIDRENNAKDVIT
GIDLDNQPVDGIEGSEAVPVVTGKAEVVTKFVAEKIEDVGDVKVKVQVDINNSAEVTGEE
PRENVVVSGNDSSRVEGELAVPAATLQTSFEVSEDVASEVTLGGQDAKNSETHEENGDLK
SQLDNEGSKPQLDNDDSKSQMDSEASKPEVNDGGSKAELDDEGSKPQLDTDVSKSQLDNE
DPKPLLENEGLRSPHEDVMHDSSTPNNQVSEVSPNLGFQVKSDSISTDSVSINEKTELKD
NIITDNVKLELDVKPEMVEESSNNIVPVGGESHPMDVEEPQEKKASVEEKDDSNATNADI
SKKNDVVDVGYSEKLNLDRSSGDDSMEEDVLESKQIDSKYNSDDIEIKSEKSEMDVVKEE
NLIDDVGNNLSIDEKEMGAESKTRPAVPAEKRKLNDQAVGSTEPVKRQRRWNSESVKVVE
PQSSNLAPTTTPKNVLQPALSRRNLSRSDSSVSNENTPKERIVPPSQRPPTDSLRIDNFL
RPFTLKAVQVLLGNTGNVTSFWMDQIKTHCYVSYSSMEEAIETRNAVYNLQWPPNGGKLL
VAEFVDPQEVKMKVEAPQSPAAPTPGAFAAPSSQPQPSPRLHVSRQQLPPPPPLPPPPPL
SNPPPAKERLGHPPPTPLPEKHDPPIVTLDDLFRKTRATPRIYYLPLSEEQVAAKLTERG
KNAKQSAGFACRRNCSSQAERCDSLMDWDFPKTASC
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgaaatacccaattcttgaaaatcggccaatagatcagtggaaggttacagag
ttaaaggaagagcttaagagacggaaattgactacgaaaggtttgaaggatgatttgata
aaacgcttagatgaagcacttcgaattgatagggaaaataatgcaaaagatgtgattact
ggtattgacttggataaccagcctgttgatggtattgaaggttctgaagctgtgccagtt
gttactggaaaagctgaagttgtcacgaaatttgttgctgaaaaaattgaggatgtgggt
gatgttaaggttaaggttcaggttgatatcaataatagtgctgaagtcactggcgaagaa
cctagggaaaatgtcgtagtgagtggtaatgattcttctagggttgaaggggagcttgct
gttcctgcggctactttgcaaaccagctttgaagtttctgaggatgtggcatctgaagta
acattgggtgggcaggatgcaaaaaattctgaaacacatgaagagaatggggatttgaag
tctcagctggacaatgagggttccaagcctcagctggacaatgatgattcaaaatcccag
atggacagtgaggcttccaagcctgaggtgaatgatgggggttccaaggctgagttggat
gatgagggttccaagcctcagctggacactgatgtttcaaaatcccagctggacaatgag
gatccaaagcccctattggagaatgagggtttgaggtctccacacgaggatgtaatgcat
gactcttctactccaaacaaccaggtatctgaggtcagccctaatttagggtttcaagta
aaatctgattctatttctactgattctgtgtcaattaatgaaaagactgaactaaaggat
aatataattactgacaatgtcaaactagaactagatgttaagccagaaatggtggaggaa
tcatccaataatattgtaccagttggtggcgaatcacatccaatggatgttgaagagcca
caagagaagaaggcatctgttgaagagaaagacgacagcaatgctacaaatgcggatata
agcaagaaaaatgatgttgtagatgtggggtactcggaaaagttaaatttagacagaagt
tccggtgatgactctatggaggaagatgttctagagagtaagcaaattgactcaaagtat
aactctgatgatattgaaattaaaagtgagaaaagtgaaatggatgttgtgaaagaggaa
aatcttattgatgatgtggggaacaacttgtctattgatgaaaaggaaatgggtgcggaa
agtaaaactcgtccagctgtgcctgctgagaaaagaaagcttaatgatcaagctgttgga
agcactgagccggtaaagaggcaacgcagatggaattctgaaagtgtcaaggtagttgaa
ccacaaagctctaatctagctcctaccaccacaccaaaaaatgttcttcagcctgctctt
tcaagacgcaacctctctcgatctgactcttcagttagcaatgagaatactccaaaagaa
cgtattgttccaccatcgcaaagacctccaactgattccctcagaatagataattttctg
cgtcctttcacactgaaagctgttcaagtgcttctaggaaacactggcaatgttaccagt
ttctggatggaccaaatcaaaacccactgctacgtgagctattcatccatggaagaagcc
atagagacacgaaatgcggtgtataacctacaatggcctccaaatggtgggaaactttta
gtggccgagttcgttgatccccaggaagtgaaaatgaaagtggaggctcctcagtctcca
gctgcaccaactcctggtgcttttgctgctccatcttcgcaacctcagccttctcctcgt
ctgcatgtttctaggcagcaacttccccccccaccacctcttccacctccaccacctcta
tctaacccacccccagccaaagaacggcttggccatccaccaccgactccacttccagag
aaacatgatcctcctattgtcactctggatgacctcttccggaaaaccagagcaactcct
cgaatctactatcttcccttgtcagaagaacaagttgcagcaaagcttacagaaagggga
aaaaatgccaagcagtctgcaggttttgcttgtagaaggaattgttccagccaagcagag
agatgtgattcgttgatggattgggattttccgaagactgcctcttgttaa
DBGET
integrated database retrieval system
