Ricinus communis (castor bean): 8265961
Help
Entry
8265961 CDS
T01087
Name
(RefSeq) methionine--tRNA ligase, chloroplastic/mitochondrial
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00450
Selenocompound metabolism
rcu00970
Aminoacyl-tRNA biosynthesis
rcu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
8265961
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
8265961
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rcu01007
]
8265961
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcu03016
]
8265961
Enzymes [BR:
rcu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
8265961
Amino acid related enzymes [BR:
rcu01007
]
Aminoacyl-tRNA synthetase
Class I (U)
8265961
Transfer RNA biogenesis [BR:
rcu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
8265961
Prokaryotic type
Other AARSs
8265961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
Anticodon_3
tRNA-synt_1e
Anticodon_1
Toprim
Motif
Other DBs
NCBI-GeneID:
8265961
NCBI-ProteinID:
XP_048231637
LinkDB
All DBs
Position
6:complement(23702553..23709520)
Genome browser
AA seq
622 aa
AA seq
DB search
MARINHSIQNTFSLLNPLYSITSKSRTTTTHLKNRLNFSKNLIFSSSASRKAQFCTCTIS
NSNSNIHNSAQNGEAVAAETFVLTTPLYYVNAPPHMGSAYTTIAADAIARFQRLLGKKVI
FVTGTDEHGEKIAAAAAACGSSPSEHCDVISQDYRTLWKDLEISYDKFIRTTDPKHEAIV
KEFYSRVLANGDIYRADYEGLYCVNCEEYKDAKELLDNNCCPMHLKPCIERKEDNYFFAL
SKYQKLLEETLTENPNFVQPSFRLNEVQSWIKSGLKDFSISRASVDWGIPVPNDNKQTIY
VWFDALLGYISALSEDKEQPNLQNAVSSGWPASLHLIGKDILRFHAVYWPAMLMSAGLGL
PKMVFGHGFLTKDGLKMGKSLGNTLEPKELVQKFGADAVRYFFLREVEFGNDGDYSEDRF
INIVNAHLANTIGNLLNRTLGLLKKNCQSTLVVDSAVAAEGNKFKDTVEKLVDKAQIHYE
NLALSVACEAVLEIGNAGNAYMDERAPWSLFKQGGAASEAAAKDLVIILEAMRIIAIALS
PVSPSLCWRIYAQLGYSKDHFNTLTWSETKWGGLKGGQVMAQPKPVFARIENKTETEDGE
ASAKKIVNRKDTKPQAKVVAEA
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggctagaataaaccattcaatacaaaacactttttctctcctgaaccctttatattca
atcacctcaaaatcaagaacaacaactacccatttgaagaatcgtctcaatttctctaaa
aatctaatcttttcgtcttctgcatcaagaaaagctcagttttgcacttgcacaattagc
aatagcaatagcaatatacacaatagtgctcaaaatggtgaagcagttgcagcagaaaca
tttgtcctcactactcctctttattatgtgaacgcccctccccatatgggtagtgcctac
accaccatcgctgctgatgccattgcccgatttcagaggcttttaggaaagaaagttata
tttgtcactggcacagatgagcatggagagaagattgctgctgctgcagctgcctgtggc
tccagcccaagtgagcactgtgatgtcatatctcaagattacaggactctttggaaagat
ttggaaatttcttatgacaagttcattaggacaactgatccaaagcatgaagcaattgtc
aaggaattttactctagggtacttgctaatggggacatttatcgtgctgactacgaaggt
ctctactgtgtcaactgtgaggagtataaggatgccaaggagctactagataacaactgt
tgccccatgcacctaaagccgtgtattgaacgaaaagaggataattatttctttgccttg
tcaaagtaccaaaaactattagaagaaactttgacagagaacccaaattttgtgcagcct
tctttccgtttgaacgaggtgcaaagctggatcaaaagtggcttgaaagatttttccatt
tctcgagcatcagtggattggggcattccagttcctaatgataataagcagaccatttat
gtctggtttgacgctttactgggttatatatcagctctatcagaggacaaggagcaacct
aatttgcaaaatgctgtttcttctggctggcctgcttcactacacttgattggcaaggat
attttacgttttcatgcagtctattggccagctatgctaatgtctgctggtctaggcctt
cctaagatggtgtttgggcatggattcttgacaaaggatggcctcaagatgggaaaatca
ttagggaatacacttgaaccaaaggagctagttcagaaattcggggctgatgcagtcagg
tacttcttccttagagaggtggagtttggcaatgatggggattactcagaagaccgtttt
attaacattgtcaatgcacatcttgccaataccataggaaacctccttaatcgtactctt
ggacttcttaaaaaaaattgtcaatcaactttggtggttgactcagctgttgcggctgaa
ggaaataaattcaaggacacagttgagaagctggttgacaaagctcagattcattatgaa
aatcttgcattgtcggtggcttgtgaggctgttctagagattggtaatgctgggaatgcc
tacatggatgaacgtgccccatggtctctttttaagcaagggggtgctgcttctgaagct
gctgcaaaggatcttgtgattatactggaagcaatgaggatcatagccattgctttatcc
cctgtctcaccaagcttatgttggagaatatatgcacagcttggctactcaaaggatcac
ttcaacactctgacctggagtgagacaaagtggggtggcctgaagggtggtcaggtcatg
gctcagcctaaaccagtctttgcaagaattgagaacaaaacagaaacagaagatggtgaa
gcatcggctaagaagattgtgaacagaaaggatacaaaacctcaagctaaagttgttgca
gaagcttag
DBGET
integrated database retrieval system