Ricinus communis (castor bean): 8265976
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Entry
8265976 CDS
T01087
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcu03016
]
8265976
Transfer RNA biogenesis [BR:
rcu03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
8265976
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_NUP159_NUP214
Beta-prop_EML_2
Beta-prop_HPS5
Beta-prop_EML
CFAP43_N
BBS2_N
Motif
Other DBs
NCBI-GeneID:
8265976
NCBI-ProteinID:
XP_015580419
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All DBs
Position
6:23799456..23805661
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AA seq
1316 aa
AA seq
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MKNLKLYSELSLNVELQSNQEAILFSAIDIERNRLFFASSTNLIYATQLSSFHNGNAWRK
SSLQAGVHPIDLEDGDFITSFDYLMEKEALIVGTSNGVMLLYNVDDNAMEVVGQVEGGVK
CIAPSPDGDLLGIVTGLGQILVMTHDWDLLYENALEEDQLDGVDVKSSISWRGDGKYLAT
LSEISNFSSLNKRLKIWERDSGALHAASDPKAFMGAVLDWMPSGAKIAAVCDRRAEHRCP
DIVFYERNGLFRSSFNISELVDATVELLKWNCSSDLLASVVRCDKYDSVKVWFFSNNHWY
LKHETRYPRKDGVRFMWDPIKPLEFICWTLEGQITIYNFMWISAVMENSTALVIDNSNIL
VTPLSLSLMPPPLHLFNLKFPSAVRDVAFYPKKSKNFVAAFLSDGCLCVVELPEFDTWEE
LDGKEIMVEACISDTVLGTLAHLTWLDSHVLLAVSHYGFSHSNCFSYTSLGEEEHHGFYL
QEIEIACSEDHVPGLVTGSGWHSKVSHINYLEDLVIGITPNPVERCSAFVQFDAGKICEY
TSTLGFGTPGGATEHYSMNFSSSCPWMTAVNSGSLNPLLFGLDDIGRLHFGGKILCNNCS
SLSFYSNLADQVITHLILATKQDFLFIVDISDILHEELESKYEKFVHVDNRRREEQNMNF
IQIWERGAKIIGILHGDAATVIIQTIRGNLECIYPRKLVLSSIVNALIQGRFRDALLMVR
RHRIDFNFILDHCGWQSFLQSASEFVNQVNNLSYITEFVCAVKNENIMEKLYRNYISFPS
KKGVEVIQGQDLRGFDANNKVSSVLLAIRKALVEIVPETPARELCILTTLARSDPPALEE
ALERIKVIRELELLGSNDPRRTSFPSAEEALKHLLWLSDSEAVFEAALGLYDLHLAAIVA
LNSQRDPKEFLPYLQELERMPSLIMHYNIDLRLQRFEKALKHIISAGDAYYSDCMNLLKK
NPQLFPLGLQLITDHAKRMEALEAWGDHLSDKKCFEDAATTYLCCSCLGKALKAYRACGN
WSGVLTVAGLLKLDKAAVLQLATELREELQALGKPGEAAKIALEYCGDVSGGISLLINAR
DWEEALRVAFMHMGEDLISDVKIASVEGANTLISEYEEGREKVGKYLTRYLAVRQRRLLL
AAKLQSEDRSVNDLDYDTVSEASSNFSGMSAYTTGTRKGSAASVSSSITSKARDKKRQRN
RGKIRPGSPGEELALVEHIKGMSLTDGAKRELRSLLIALVMLNEEELARKLHRVGESFQL
SQTAAVKLAEDSMSTDSINEQALSLEHYIQKARSDPQNLEAFSWRPKVFSSTLTLK
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacctgaagctatattcagagttatctctaaatgttgaattacaatcaaatcaa
gaagcaattctcttctctgctatcgatattgaacgcaaccgtttgttctttgcctcttca
actaatttgatctacgccactcagctttcttcttttcataatggaaatgcttggagaaag
agctcactccaagcaggagttcatcctattgatttggaggatggggactttattacttca
tttgattatcttatggagaaggaggcgctgattgtaggcactagtaatggagttatgttg
ctctataatgtggatgataatgctatggaggttgttggtcaagtagaaggtggtgttaag
tgcattgcgcctagtccggatggcgatttgcttggaattgtaactgggttaggacagata
ctggtgatgactcatgattgggatttgttgtatgaaaatgcattggaggaggatcaactt
gatggtgtagacgtaaagagttccatatcctggagaggtgatggaaaatacttagcaaca
ctgagtgagatctccaacttttcttccttgaataagagactgaagatctgggaacgagat
tcaggtgcattgcatgctgcttcagatccaaaggcattcatgggagcagttttggattgg
atgccaagtggagcaaaaattgcagctgtatgtgatagaagagctgaacataggtgtcct
gatattgttttttatgagagaaatggattgtttagaagctcttttaacatcagtgaacta
gtggatgcaacagtagaattgctcaagtggaattgtagttcagatcttcttgcatctgtt
gtcagatgtgataaatatgactctgttaaagtttggtttttcagcaacaaccattggtac
ttgaaacatgaaactagatacccaaggaaggatggagtgaggtttatgtgggatccaata
aagccactggagtttatatgttggactcttgagggccagattacaatctacaacttcatg
tggatcagtgctgtcatggagaactcaactgcattggtcatagataactccaatatactt
gtaactccactttctttgtccctcatgccacctcctctgcatttatttaatctgaaattt
ccaagtgctgttcgggatgtggctttttatcccaagaagtcaaagaactttgtggctgca
tttttgtcagatggctgtctatgtgttgtagaacttcctgaatttgatacatgggaggaa
cttgacggcaaagaaattatggttgaagcttgcatttctgacacagtgttaggaaccctt
gcacatcttacgtggttggattcacatgtacttcttgctgtttctcactatggtttctct
catagtaattgcttctcctatacctcattgggtgaggaagaacatcatggtttttatttg
caggagattgaaattgcatgttctgaggatcatgtcccaggtttagtaacgggttcaggt
tggcattcaaaggtttcccatatcaattatttggaagaccttgtgattgggattactcct
aaccctgttgaaaggtgctcagcttttgtccagtttgatgctggaaaaatctgtgagtat
acatcaacattagggtttggtactcctggaggagctacagaacattatagtatgaatttt
tcatcatcatgcccttggatgactgcagttaatagtggctcattaaatcctttgcttttt
ggacttgatgacattggtaggctccattttggtggaaaaatactatgcaacaactgtagt
agcttgtcattctactcaaatctggccgaccaagtgatcacacatttgattcttgcaacc
aaacaggattttctctttattgttgatattagtgatatattgcatgaagaactagagtca
aaatatgagaagtttgttcatgttgataacagaagaagagaagaacaaaacatgaacttc
atacaaatatgggagagaggtgccaaaattattggcatcctgcatggtgatgctgccact
gtcattattcaaacaattcgtggaaatctagaatgtatttatcctagaaaattggtgttg
tcatcaattgtcaatgctttgatccaagggcggtttagggacgcactactcatggttagg
cggcatagaatagattttaatttcatccttgatcattgtggttggcaatcatttcttcag
tcagcctcggaatttgtcaatcaggttaataatttaagctacataactgaatttgtctgt
gctgtaaaaaatgaaaacatcatggagaagctgtacagaaattacatctcttttcctagc
aaaaaaggggttgaagttattcaaggccaagatctcaggggttttgatgctaataacaag
gtttcttctgtcctgctggccataagaaaggctcttgtggaaattgtccctgaaactcca
gctagggagctctgtattttaaccactctagctcgtagtgatcctcctgctcttgaggaa
gctttagagagaataaaagttatccgtgaactggaattattaggctctaatgatcctagg
agaacttctttcccttctgcagaagaagccttgaagcatctgttgtggttatctgattct
gaggctgtatttgaagctgccttaggcctttatgatttgcaccttgcagctattgtggca
ctaaactctcaacgagatccaaaggaatttcttccttatctacaagaactagagcggatg
ccaagtctcataatgcactacaatattgaccttaggctgcagaggtttgagaaagctctc
aaacacattatttcagctggtgatgcttattattcagattgtatgaatctcttaaagaaa
aatcctcaactctttcctttgggactccaactaatcactgatcatgccaagagaatggag
gcccttgaggcttggggtgatcatcttagtgataaaaaatgctttgaggatgctgctact
acttatctctgttgttcttgtttgggaaaggccttgaaggcttatcgtgcttgtggtaat
tggagtggggtgcttacagttgcagggcttcttaaactggataaagctgctgtattgcaa
cttgctactgaactccgtgaagaactccaagcactaggaaaacctggggaagctgcaaaa
attgctctcgagtattgcggagatgttagtggtgggataagtttgttaatcaatgccagg
gactgggaggaagctttacgtgttgcctttatgcacatgggagaagatttaatctcagat
gtgaagattgcttctgtcgaaggtgcaaacactcttattagtgaatatgaggaaggccga
gagaaagtaggaaagtacctgactcgctacttagctgtccggcagagaaggttactgctt
gcagcaaagcttcagtcagaggatcgatcggtgaatgatctagattatgatactgtttct
gaagctagcagtaactttagtggaatgagtgcctacaccacagggacaaggaagggctcc
gctgcttctgtgagctctagtattactagcaaggcaagagacaagaagcgtcaaagaaat
agagggaaaattcgccctggcagtcctggcgaggagttagctctggtggagcatataaaa
ggcatgtctttaacagatggtgcaaagcgtgagcttagatctttactgattgcccttgtg
atgcttaacgaagaggagctagcaagaaagctgcatcgtgtcggagagagttttcaactg
tctcaaacggctgcagtaaagctagctgaagactcaatgtctactgatagcataaatgaa
caagcactaagtctggagcattacatacagaaagcaagatctgatccacaaaatttagaa
gctttctcttggcgacccaaagtgttttcttctactttaaccttaaagtga
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