Ricinus communis (castor bean): 8266324
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Entry
8266324 CDS
T01087
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3 isoform X4
KO
K14829
pre-rRNA-processing protein IPI3
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rcu03009
]
8266324
Ribosome biogenesis [BR:
rcu03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
8266324
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
EIF3I
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_IFT122_1st
DUF1513
Motif
Other DBs
NCBI-GeneID:
8266324
NCBI-ProteinID:
XP_002511209
UniProt:
B9RAI4
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All DBs
Position
4:complement(27739811..27743344)
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AA seq
471 aa
AA seq
DB search
MGRGREALVGCSDRSMGTGISIWDVETGDRLMHIPTCASAPHGLLCLKDQFLVASQVNKH
GSVGGGAIFTWPLNKPQSPLRSYPLEAIGPIACTTDGVYLAGGSPSGNAYIWEVTSGRLL
KTWGAHHSSLKCMVFSNDDSLLISGSDDGIICMWSMISLLDMENSGSSSSLLHYSSEHKS
SISGLLTTSGNSNSTFISSSLDATCKAWDLVSGEPIQSQEYPLAITAIILHPVDQFLFAG
CIDGRIFVSMLNVGLVDDPLVIAEDPLVVLEGHKGSITALTFSTLGLISASEDCTICLWD
AVSWVAIQRFNYHKGAVTNVVVIQHSLLLPSSSHQRVPNRLCVSPLDKCQPPNSSMGTTT
LRRTCFSLDDNYNSLNVGTISLERQIFEMEEEHTPAALQMKAETSIVQRMWATRMTKHVM
EMNKHLQSRLLDLMQIRLLWNTEDNESNRRKKKKLKIETPLEEEKLLQSQN
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggggaagagaggcattagtgggatgcagtgataggagtatggggacaggaata
tcaatttgggacgtcgaaactggagatcggcttatgcatattccaacatgtgcttctgct
cctcatggtttattgtgcctgaaagaccaattccttgtagcttctcaggttaataagcat
ggatctgtaggtggcggggctatcttcacctggcccttgaacaagcctcaatcaccactt
cggagctacccacttgaagctattgggccgattgcttgcaccacggatggagtgtatctt
gcaggtggttctccttctggaaatgcttatatttgggaggttactagtggaagattactc
aaaacctggggtgcccatcattcatctttgaagtgcatggtattttctaatgatgactct
ctccttatttctggttcagatgatggcattatctgtatgtggtctatgattagtttgcta
gatatggagaattcgggaagctcttcttcattgttgcactattcatcagagcataagtcc
tccataagtggtctgttaacaacatccggcaattcaaactcaacttttatctcaagctcc
cttgatgctacgtgcaaggcttgggacctggtctctggtgagcctattcaaagtcaggaa
tatccactggcaattactgcaatcatccttcatccagtggatcaattcctgtttgctgga
tgtatagatggaagaatatttgttagtatgcttaacgttggactagtggatgatcctttg
gttattgctgaagatccacttgttgtgcttgaaggacacaaaggatctataacagcattg
accttcagtacattaggtctgatatcagcatctgaggattgtacgatctgcctctgggat
gctgttagttgggttgctatacaaaggtttaactatcacaaaggggcagtaactaatgtt
gtagtgattcagcactctttgctgcttccttcatcaagccatcagagagttcccaatcgt
ctctgtgtttctccactggacaaatgccagccacccaactcatccatgggaaccaccact
ctccgtcgcacatgtttttccctcgatgacaattacaattctctgaatgtcggaaccatt
tccttggagcgacaaatatttgagatggaggaagaacatacacctgcagctttgcagatg
aaggcagaaacaagcatagtccagcggatgtgggctacaagaatgacaaagcatgttatg
gaaatgaacaagcatttgcaatcccgtttgctagatttgatgcagatccggttgctatgg
aacactgaagataatgagagcaacagaagaaagaagaagaagctcaaaattgaaactcca
ctcgaggaagagaagctactgcagtcccaaaattaa
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