Ricinus communis (castor bean): 8266400
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Entry
8266400 CDS
T01087
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
8266400
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rcu01009
]
8266400
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8266400
03036 Chromosome and associated proteins [BR:
rcu03036
]
8266400
Protein phosphatases and associated proteins [BR:
rcu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
8266400
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
8266400
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
8266400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_G
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ComGF
Motif
Other DBs
NCBI-GeneID:
8266400
NCBI-ProteinID:
XP_048233894
LinkDB
All DBs
Position
8:7965469..7974716
Genome browser
AA seq
515 aa
AA seq
DB search
MNGGDEVTAAPAGPPQPLDWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGG
RVVLFERTDTKDHGGSRRDLERMDFPISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK
IRWCQTANGALFLLSTNDKTIKFWKVQEKKVKKISDMNVDPSKTVGNGSVASSSNSSSAK
PHLANGGWPEKSYSCPSNDFTVPPGGIPSLRLPVVVTSNETSLVARCRRVYAHAHDYHIN
SISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPNHCNM
LAYSSSRGSIRLIDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFAKDGRHIL
SRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGS
YSNLFRVFGCASGSNEATTLEASKNPMRRQVQTPSRPSRSLSSITRVVRRGAESPGVDAN
GNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtggcgatgaggtcactgcagctccggcgggcccaccacagccgctggattgg
aaattttctcaggtcttcggcgagagaacagccggtgaagaagttcaggaagttgatatt
atttcagctattgaatttgataaaagtggtgatcatcttgctactggtgaccgtggaggc
cgagtagttctttttgagaggacagacacaaaggatcatgggggatccagaagggatctg
gagaggatggattttcctatcagtaggcatcctgagtttcgttataaaacggagtttcag
agccatgaacctgagtttgactatctcaagagtttggaaatagaggagaaaattaacaaa
atcagatggtgccaaacagccaatggtgctctttttctcctatctactaatgataaaacc
atcaagttctggaaggtccaagaaaagaaggttaagaaaatttccgacatgaatgtggac
ccttccaaaactgtaggaaatggtagtgttgctagttcaagtaattcaagtagtgctaaa
ccacatcttgcaaatggaggttggccagagaagtcatacagttgtccaagcaatgacttc
actgtcccacctgggggcattccatcactgcgtttacctgtggtagtaactagtaatgag
accagtttggtggctagatgccgtagggtttatgcccatgctcatgattatcacatcaat
tcaatttcaaacaacagtgatggtgaaacctttatatcagctgatgacctgcgcatcaat
ctgtggaacttggagattagcaatcaaagttttaatattgttgatgtgaaacctgcaaat
atggaggatctaactgaggttataacatctgcggaattccaccccaaccattgcaatatg
ttagcatatagcagttcaagaggttcaattcgactcattgatttacgccaatcggcttta
tgtgattctcatgccaaattgtttgaggaacaggaggcaccgggctctagatcatttttc
acggagataattgcttcaatctcagatattaaatttgctaaggatggaagacatatactt
agccgtgactacatgactcttaagttgtgggacatcaatatggattcgggtccagttgca
accttccaggttcatgagtatttaagacccaagttgtgtgatctatatgaaaatgattca
atctttgataaattcgagtgttgcctgagtggtgatggactacgagtggcaacaggatct
tacagcaatctgttccgtgtgtttggttgtgcctctggcagtaatgaggcaactactttg
gaagccagcaaaaatcctatgagaagacaagttcagaccccttcaaggccttcgagatcc
ctaagcagtataacacgtgttgtaagacggggagcggagagcccaggagtcgatgcaaat
gggaattcttttgatttcaccacaaagttgctccatctagcgtggcacccaacagaaaac
tcgattgcctgtgctgctgcaaacagcttgtacatgtactatgcataa
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