Ricinus communis (castor bean): 8266404
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Entry
8266404 CDS
T01087
Name
(RefSeq) protein argonaute 16 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8266404
03036 Chromosome and associated proteins [BR:
rcu03036
]
8266404
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
8266404
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
8266404
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
8266404
microRNA pathway
RISC loading complex
8266404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL2
ArgoMid
ArgoL1
AGO_N
Motif
Other DBs
NCBI-GeneID:
8266404
NCBI-ProteinID:
XP_048233232
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All DBs
Position
7:22065465..22074719
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AA seq
907 aa
AA seq
DB search
MDKETGGSPPPPVPTNGKTKKADAPKHSIVSRQGFGNSGHRIPLLSNHFKVSINIPDAVF
YQYSVSFTSEDDRVVEVKGIGRKLIERLYQTYYTDLGDTKFAYDGEKTLYKFAYDGEKTL
YTVGPLPQNKLEFTVVLEESFAKHGNGSPESGGSPTATSKRSKRSFHSKSFKVAISYAAK
IPLKSIGLALKGVEANNSTQDALRVLDIILRQQAANRGCLLVRQSFFHDDSRNFIDVGGG
VTGVRGFHSSFRTTQCGLSLNMDVSTTMILTPGPVIDFLLANQNVREPRYIDWVKAKRML
KNLRIKPRHRNMEFKIRGLSEKPCNQQYFPMKMKNSESANAEPQTVEITVYEYFTRHCGI
ELTFSAFLPCLDVGKPKRPNYLPIELCSLVSLQRYTKALSSVQRASLVEKSRQKPLDRIK
TVTDAVRNYRYDDNPMLSVCGISIEKQLTQVEGRVLETPKLKVGNSEDCVPRNGRWNFNN
KTLWKSTTIERWALVNFSARCDTSQISRDLVNCGRRKGIQIERPYTLIEEDTQSRRGGPL
ARVEKMFEQIRAKLPSAPQFILCVLPERKNSDIYGPWKKKCLSDFGIVTQCISPFKINDQ
YLTNVLLKINSKLGGINSLLEIEHSKQIRLIMDTPTMILGMDVSHGARGCSDIPSVAAVV
GSRYWPLISRYRACVRTQSPKVEMIDALFKLTDDKNDDGIMRELLVDFYQTSNGRKPKQI
ILFRDGVSESQFNQVLNIEVEQIKQAYQHLGEAETPKFTVIIAQKNHHTKLFQSSGPENV
PAGTVVDTKIVHPRNYDFYMCAHAGMIGTSRPAHYIVLLNEIGFSPDDLQNLIHSLSYVY
QRSTTAISIVAPVCYAHLAAQQMGQFMKFEDLSETSSGHGSMTSAGPIPVPELPRLHKDV
AGSMFFC
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagaaactggtggatcccctccacctccagtgccaactaatgggaagacaaag
aaggcagatgctcccaaacattctatcgtcagtaggcagggatttggaaatagtggccac
cgcatacctttgctcagcaaccactttaaagtttctatcaacattccagatgctgtgttt
taccagtatagtgtttcttttacttcagaagatgacagagttgttgaagtcaagggaatt
ggccgaaagctaattgagaggctctaccaaacatattacactgaccttggtgatacaaag
tttgcttatgatggcgaaaaaacgctctataagtttgcttatgatggcgaaaaaacgctc
tatacagtgggccctctgccacagaacaagttggagttcactgtagtgcttgaggagtca
tttgcaaaacatggaaatgggagtccagaaagtggtgggagccctactgcaacttctaag
aggtcaaaacgctcttttcattcaaagtcttttaaagtggcaataagctatgctgctaaa
attcccttgaaatccattggtcttgctctgaaaggagtcgaggcaaataatagcactcaa
gatgctctaagagtattagatattatcttgaggcagcaagcagctaacaggggttgcctt
ttggtgaggcagtcattctttcatgatgattcaaggaactttattgatgtcggagggggt
gtaactggtgttcggggattccattccagcttccgtaccactcagtgcggcttgtctctc
aatatggatgtgtctacaacaatgatcttaacacctggaccagtgattgattttctgcta
gctaatcagaatgtacgggaaccacgctatatcgactgggtaaaggcaaaaaggatgttg
aaaaatttgaggattaagcctaggcaccgtaacatggaatttaaaattagaggcttgagt
gagaagccctgcaatcagcagtatttccctatgaaaatgaaaaacagtgagagtgcaaat
gccgaaccacagactgtggagataactgtgtatgagtacttcactagacactgtggcata
gaactcaccttctccgcattcctgccttgccttgatgttggaaaaccaaaacggccaaac
tatctgccaatagagctttgttcgcttgtttcactgcaacgctatacaaaagctctatca
tcagttcaaagggcatctttggttgaaaaatctcgacaaaagccactggatagaataaaa
actgtgactgatgctgtcaggaactaccgctatgatgataatcctatgctttctgtatgt
ggtatatctatagaaaaacaattgacacaggttgagggtcgtgtacttgagactccaaag
ttgaaggttggaaacagcgaggactgtgtccctcgtaatggacggtggaacttcaataac
aagacactttggaaatccactaccattgaacgctgggctcttgtcaacttttctgctcgc
tgtgatactagtcaaatttctcgtgatcttgttaactgtggaagaagaaagggcatacaa
attgaacgaccatatacattaattgaggaggacacacaatctagaagaggcggtcctctt
gccagagtagaaaagatgtttgagcagattagagctaagcttccaagtgctccacaattt
attttgtgtgtcttgccagagaggaaaaactctgatatttatggaccatggaagaaaaaa
tgtctgagtgattttggaatcgtcacacagtgcatttctccttttaaaattaatgatcag
tatcttacaaatgtacttcttaagatcaactctaagcttggaggaataaattctttgttg
gaaattgagcattccaaacaaatacgcctcataatggatactcccacaatgattttgggc
atggatgtgtctcatggcgctcgtggttgttcagatattccatctgttgctgcggttgtt
gggtctcgatattggccattgatttcaaggtatagagcatgtgtaagaacacaatctcct
aaggtggagatgattgatgctctattcaagcttacagacgataagaatgacgatggcatc
atgagagagctgctagtggacttctatcagactagcaatggacgcaaaccaaagcagatt
attctcttcagggatggagtgagtgagtcacagtttaatcaggttttgaacattgaagtg
gagcaaatcaaacaggcctatcagcatcttggtgaggctgaaactcccaaattcactgta
attattgctcaaaaaaatcaccacacaaagctatttcaatctagtggccctgaaaatgtt
cctgctgggacagttgtagatacaaagattgtgcatcctagaaattacgacttctacatg
tgtgctcatgctggaatgataggcacttcaaggccagcacactacattgtcctgcttaat
gagattggattttctccagatgacttgcaaaatcttatccactctctttcttatgtgtac
cagaggagcactactgccatctctattgtggccccagtatgttatgctcaccttgctgca
cagcagatggggcagttcatgaagtttgaggatttgtctgaaacctcctcaggacatgga
agcatgacttctgcagggcctattcctgttcccgagctgcctaggttgcacaaggatgtc
gcgggttcaatgttcttctgctga
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