Ricinus communis (castor bean): 8266407
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Entry
8266407 CDS
T01087
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
8266407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcu03021
]
8266407
Transcription machinery [BR:
rcu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
8266407
Prokaryotic type
Archaeal type
TFE
8266407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
FYVE_2
ADK_lid
Dimerisation
wHTH-PRTase_assc
zf-C2HC_2
Cas12f1-like_TNB
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
8266407
NCBI-ProteinID:
XP_048230335
LinkDB
All DBs
Position
5:complement(712855..719273)
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AA seq
473 aa
AA seq
DB search
MSIEPFKRLVKLAARAFYDDITKGENQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAKD
LKLHLKQLRRILRFFEEEKLVTRDHRKETAKGAKLFSVAVAATAEGQQSGKGDEKIKLHT
HSYCCLDYAQIYDVVRYRLHRLRKKLKDELENKNTIQEYICPNCGRRYNALDALQLLCPD
DEYFHCENCNGELVTESDKLAAQEGGDGDDNARRRQREKLKDLLQKMEVQLKPLMDQLNR
VKDLPVPEFGNLQAWEARASAAARAANGNASSNDPSKSQGLGYSGTPMPFLGETKVEVAF
SGVGGKEEDVKPETEGSGLKVLPPWMIKQGMNLTKEQRGEVVKQESKMDGSSAAPEFSDD
KKAINNGDSATQYQDEYAKAYYAALFKRQQELEEAAKKQESSHTPISNGVTELSSNRQVG
MKSKREEDEGEDEIEWEESTTGGNATESYKVNDLNVEAEASGDEEDDIDWEEG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgaaccattcaagcgactagtgaagcttgcggctcgagctttttatgatgat
ataactaaaggggaaaatcagcccaaaacaggaaggagtgataacagagggattgctgtg
gtggtgcttgatgctttaaccagacggcaatgggtaagagaagaagatctggcaaaggat
ttgaaattgcacttaaagcaactccgtaggatcctgcggttttttgaggaagaaaaacta
gttacacgagatcataggaaagagacagctaagggagcaaagctattcagcgttgccgtg
gctgccactgctgaaggtcaacagtctggaaagggggatgaaaagataaagctacatact
cactcttactgttgtctggattatgcacagatatatgatgttgttaggtacagattgcat
cggttgcggaaaaagctgaaggatgaattggaaaacaagaatactattcaagagtatatt
tgtcccaactgtgggcgaaggtacaatgctttggatgctcttcaattgctttgtccagat
gatgaatactttcactgtgaaaattgcaatggagaacttgtgacggagagtgacaagtta
gctgctcaagaagggggagatggagatgacaatgcaaggaggcgacagcgtgaaaaatta
aaggacttgcttcagaaaatggaggtacaacttaagccattgatggatcaacttaacaga
gtgaaggatttgcctgttcctgaatttggaaaccttcaagcatgggaagctcgagcaagt
gctgctgcacgtgcagcaaatggcaatgctagctccaatgatccttctaagtcgcaaggg
ctgggttatagtggaacaccaatgccattccttggggagacaaaggttgaagttgccttt
tctggtgttggaggcaaggaagaggatgtcaaaccagaaactgaaggttcaggtttgaaa
gttttaccaccatggatgattaagcagggaatgaaccttacaaaagagcaacgtggagag
gtcgtcaagcaggagagtaagatggatggcagttcagcagcaccagaattctcagatgac
aaaaaggccatcaacaatggtgatagtgctacgcaatatcaggatgagtatgctaaagct
tattatgctgcactgttcaagagacaacaagaactagaagaagctgctaagaagcaagag
tcatcacacacacccatctctaatggtgttactgagttgtcctctaatcgacaagtgggc
atgaaatccaaacgtgaggaggatgaaggagaagatgaaattgaatgggaagagagcaca
acaggaggcaatgcgactgaaagctacaaggtcaatgacttgaatgttgaagcagaagct
tcaggagatgaggaggatgatatagattgggaagaaggctga
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