Ricinus communis (castor bean): 8266683
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Entry
8266683 CDS
T01087
Name
(RefSeq) WD-40 repeat-containing protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03082
ATP-dependent chromatin remodeling
rcu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
8266683
03083 Polycomb repressive complex
8266683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcu03036
]
8266683
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
8266683
Histone modification proteins
HAT complexes
HATB complex
8266683
HDAC complexes
Sin3A-HDAC complex
8266683
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
8266683
PRC2.2
8266683
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
8266683
Heterochromatin formation proteins
Other heterochromatin formation proteins
8266683
Chromatin remodeling factors
NuRD complex
8266683
NuRF complex
8266683
NuRF complex (fruit fly)
8266683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
WD40_RFWD3
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_RIG_1st
MIOS_WD40
eIF2A
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
8266683
NCBI-ProteinID:
XP_002526518
UniProt:
B9SKI8
LinkDB
All DBs
Position
1:84644..87594
Genome browser
AA seq
424 aa
AA seq
DB search
MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPDKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLDDAENDARHYDDDRSDMGGFGAANGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTVSAEVYLFDYSKHPSKPPLDGACSPDLRLRGHSTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINSTPKNKSLDAFQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQMAENIYHDEDDIPGDES
NKGS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagatgaagaagaaatgagaggggagatagaggagagactgattaacgaagaa
tacaaaatatggaaaaagaacacgccatttctatacgatctggtgataactcatgccctc
gagtggccttccctcactgtcgaatggctgccagaccgcgaggagcctcctgataaggat
tactccgtccagaagatgatccttgggactcacacctccgagaacgagcctaactacctt
atgctggcccaggtccagcttcccctcgatgatgccgagaatgacgcccgccactacgac
gacgatcgctccgatatgggtgggtttggagcagccaacggcaaagtccaaatcattcag
caaatcaatcacgatggcgaggtcaacagggctcgttacatgccccaaaaccctttcatc
attgccacaaagaccgtcagtgcagaagtctatctctttgactacagcaagcacccttca
aagccccctctggacggcgcttgttctcccgatttgcggttgagaggccacagcactgaa
ggatacggattgtcctggagtaagtttaaacaaggtcacttgcttagcggttctgatgat
gctcaaatatgcttatgggacatcaattctactcctaaaaacaagtcccttgatgctttc
caaatctttaaggttcatgaaggcgttgttgaagatgttgcctggcatctcaggcacgaa
tacttatttggctctgttggggatgatcaatacctcctcatatgggatctccgcactcct
tctgtctccaaacctgtccaatctgttgttgctcaccagagtgaggttaattgcttggct
tttaatcctttcaatgaatgggttgtggccacgggatctacagataaaactgtcaagttg
tttgatatacggaagatcaatacagcacttcacacatttgattgccacaaggaggaggtt
ttccaagttgggtggaaccccaaaaatgaaactattttagcttcttgttgccttggcaga
aggctcatggtgtgggatcttagcaggatcgatgaagaacagacacctgaggatgctgaa
gatggtcctccagagttgctttttattcatggtggtcacacaagtaaaatatcggatttt
tcgtggaatccttgtgaggactgggttattgcaagtgtagctgaagataacatacttcag
atatggcagatggcagagaatatctaccatgatgaagatgacatacctggggatgaatcc
aataaagggtcctag
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