Ricinus communis (castor bean): 8266901
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Entry
8266901 CDS
T01087
Name
(RefSeq) KH domain-containing protein HEN4 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8266901
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
8266901
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
8266901
NCBI-ProteinID:
XP_048231495
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Position
6:complement(18083925..18099479)
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AA seq
722 aa
AA seq
DB search
MMGSNFLYPPSKRPIQYNAAGMPDPNPTANGLSNKRPKQPPANQNAAAPLPLPPGHVSFR
LLCHASRIGGIIGKSGTIIKQLQQQSGAKIRIEESPAESSDRVITVIAEGQIVSKVRVES
EEVDVSRAQEGLIRVFERILEVAAESDGINVVAGGGGVVSCRMLAGSKQAGSVIGKGGKV
VEKIRKDCGVKIRVLTDKLPVCAGPNEEMIEIEGDILSVKKALIAVSRCLQDCQPVDKPR
VGSSKYFEAVPQEPLPEMRVEIAPQRNIMVPTMQNNAVSCAPVPHNFLLETDRVPSLDMK
LFQQEVVFKILCPNDMVGGVIGKGGTIIKALQNETGASITIGATIAESDERLITVIASEN
PESRYSAAQKAVVLVFSRSVEAGTEKGLDSSSGKGFPFAARLVVPSNQVGCLLGKGGIII
SDMRKTTGTSIKILAGDQLPKCVPENEQVVQISGDFMNVKDAVYHVTGRLRDNLFSSALS
TPVTRSTTVITEASPYGRLKEPLRDAFKEPLNTFREPLGDAFRDPLRAAMRGPLRDARRD
PLRDSFGDTLRDQLRDTLKEPPRGPAPYNLHPPIGVSHSLNRHNTLTQSMDHLGLSHSLD
GPISPRLWASQTMAGINPRVVPDASRGFTSFKGGLELGSGSKSAIVTNTTVEIRVPENVI
GSVYGENDSNLTRLRQISGAKVIVHEPRLGSSDRIIVISGTPDETQAAQSLLQAFILTGQ
SC
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaagtaactttctttatccaccgtcaaaacgaccaatacaatacaacgcagct
ggaatgcccgacccgaacccgacagcgaatggattatccaataaacgacctaaacaacct
ccggctaatcaaaatgcagcagcgccgttacctttaccgccaggacacgtatcgttccga
ttgctctgccacgcgtcgagaatcggtgggataataggaaaatcaggaaccataatcaag
cagttacagcagcaaagcggagccaagatccgaatagaagagtctccggcagagtcatcg
gatagggttataacggtaattgcagaaggtcagattgtttccaaagtaagggttgagagt
gaagaagttgatgtttcgagagcacaggaaggtttaattagggtttttgagaggattttg
gaagtggccgcggagagtgatgggataaatgtggtggctggtggaggaggtgttgtttcg
tgtagaatgttagctgggtcgaagcaggcgggttcggttattgggaaaggagggaaagtt
gttgagaagataaggaaagattgtggtgttaaaatcagggttttgactgataaattgccc
gtttgtgccggacctaatgaggagatgatcgagattgagggcgatattttatctgtaaag
aaagcactaattgcagtttctcgctgccttcaagattgtcaaccagttgataaaccaagg
gtgggtagcagcaaatattttgaggcagttccccaagaacctttgcctgaaatgcgtgta
gagattgccccgcagcgtaatattatggtaccaaccatgcaaaataatgccgttagttgt
gctccggtgcctcataattttttgttagagactgatagggttccctccttggacatgaag
ttgttccaacaggaagtggttttcaaaattctttgtcccaatgacatggttgggggtgtt
attggaaagggaggcaccattatcaaggctctccagaatgaaacgggcgcttctattact
ataggagctactatagctgagagtgatgaacgtctgatcactgttattgcttcagagaat
ccagaatctcgatattctgctgcacagaaggctgttgtccttgtgttctcaaggtctgtg
gaggctggcactgagaagggactagattcaagctcaggtaaggggttcccttttgctgcc
aggcttgttgtaccatcaaaccaggttggttgtttgttgggaaaaggaggcattataatt
tcagacatgcgtaagacaactgggactagcataaaaatcttagctggtgaccagcttcca
aagtgtgtaccagaaaatgaacaagtggtgcagatttcaggagatttcatgaatgtgaag
gacgcagtgtatcatgtaactggcagactccgagataacctgttctccagtgcactgagt
actcctgttacaaggagcactactgtaataaccgaggctagtccctatggaagactgaag
gagccattgagggatgcctttaaggagccattgaatacctttagagagccgttgggagat
gcatttagggatcctttgagggctgcaatgaggggtcctttgagggatgcaagaagggac
cctttgagagattcttttggggatacattgagggatcagttgagggatacattgaaggag
cctccaaggggtcctgccccttataatttgcacccaccaattggtgtttctcatagttta
aatcgacataatacgcttacacagagtatggatcatctaggactttcccatagtttagat
ggccccatctcaccgaggttgtgggcatcacagacaatggctggaataaatccgagggtt
gtcccagatgccagtagaggatttacttcatttaaaggtggcttagaacttggcagtgga
agcaaatctgctatagtgacgaacacaactgtagagattagagttcctgaaaatgttatt
ggctctgtgtatggggagaatgatagcaatcttactcgtttgagacagatctcaggcgcc
aaggttatagtgcatgaacctcgtctaggatcaagtgacaggattatcgttatatctggg
acccctgatgaaacccaagcagctcaaagtcttcttcaagcatttatcctcactggacaa
tcatgctaa
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