Ricinus communis (castor bean): 8266958
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Entry
8266958 CDS
T01087
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
8266958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8266958
03110 Chaperones and folding catalysts [BR:
rcu03110
]
8266958
03029 Mitochondrial biogenesis [BR:
rcu03029
]
8266958
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcu04147
]
8266958
Enzymes [BR:
rcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
8266958
Messenger RNA biogenesis [BR:
rcu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
8266958
Chaperones and folding catalysts [BR:
rcu03110
]
Heat shock proteins
HSP60 / Chaperonin
8266958
Mitochondrial biogenesis [BR:
rcu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
8266958
Exosome [BR:
rcu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
8266958
Exosomal proteins of other body fluids (saliva and urine)
8266958
Exosomal proteins of breast cancer cells
8266958
Exosomal proteins of colorectal cancer cells
8266958
Exosomal proteins of bladder cancer cells
8266958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
8266958
NCBI-ProteinID:
XP_002527401
UniProt:
B9SN32
LinkDB
All DBs
Position
8:complement(7711010..7717884)
Genome browser
AA seq
573 aa
AA seq
DB search
MYRIASRLASSFGSSPSKKLVYGQLICSRSYVAKDISFGVGARAAMLQGINEVAEAVKVT
MGPKGRNVIIEKSHGGPKVTKDGVTVAKSIKFKENAKNIGADLVKQVANATNTAAGDGTT
CATVLTQAILTEGCKSVAAGVNVMDLRTGINMAIDAVVSDLKKSALMISTPEEITQVATI
SANGEREIGDLIARAMEKVGKEGVITVADGNTLENELEVVEGMKLARGYISPYFITDQKT
QKCELENPFILIYEKKISDMNSLVRILELAVNKNRSLLVVAEDVESESLAMLILNKHHAG
VKVCAIKAPGFGENRKANLDDLAILTGGEVISDDRGLTLDKVQIEMLGTAKKVTVSLDDT
IVLHGGGDKKLIEERCEELRTAMDKSTAMFDKEKAQERLSKLSGGVAVFKVGGVSEAEVG
ERKDRVTDALNATRAAVEEGIVPGGGVALLYATKALDDLQAQNEDQKRGIEIIQNALKAP
TSTIVSNAGFNAPVVLGKLLEQDDHNLGYDAAKGEYVNMVQAGIIDPLKVIRTALVDAAS
VSLLLTTTEAAVVDNPNEKKPPSRMPDMDAMDY
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtatagaatagcttcaagattagcttcatcctttggctcctccccttcgaagaaactg
gtttatggtcagcttatatgcagcagaagttatgtggctaaagatatcagttttggggtt
ggggctcgtgcagctatgttgcagggaatcaatgaggttgcagaagctgtcaaagttaca
atgggaccaaagggtcgcaatgttataatcgagaaaagtcatgggggtcccaaggtgaca
aaggatggtgtcactgttgccaaaagcatcaagttcaaagaaaatgctaagaatattggt
gcagaccttgtaaagcaggttgcaaatgctacaaataccgcagcaggagatggtacaaca
tgtgcaactgtcctgacccaggcaatactcacagagggttgcaagtctgttgctgctggt
gttaatgttatggatttgcgaactggtattaatatggctattgatgctgtcgtttctgac
ttgaaaaagagcgcactaatgataagcacaccagaagaaatcacacaggtagccaccatc
tctgcaaatggtgaacgtgagattggagacctgatagcaagagcaatggaaaaagttggg
aaggaaggagtcatcactgttgctgatgggaatactttggaaaatgagttggaagtagtg
gaaggaatgaaacttgccagaggttatatatctccttattttattactgatcagaagacc
cagaaatgtgaacttgaaaacccttttatcctcatttatgagaagaaaatttcagacatg
aattcacttgtaagaatattggaactggcagtaaataaaaacagatcacttctagttgtg
gctgaggatgtggagagtgaatctctagctatgcttattctcaacaagcatcatgctgga
gttaaggtttgtgccattaaagctcctggttttggggaaaacagaaaagcaaatttggat
gacctcgccattcttaccggtggagaggttatcagtgatgatcgtggtttgacattggac
aaagtccaaattgaaatgcttggtactgctaagaaggttactgtttctcttgatgacaca
atagttcttcatggtggtggggataagaaactgattgaagaaagatgtgaggagctgagg
acagccatggataagagtactgccatgtttgacaaggaaaaagctcaggaacgactgtca
aaactgtctggtggagttgctgtattcaaggttgggggggttagtgaggcagaagtggga
gagagaaaagatagggtaacagatgctttaaatgctaccagagcggctgtggaagaggga
attgtgccaggtggtggtgttgcccttttgtatgccacaaaagccttagacgatcttcaa
gctcaaaatgaagaccagaaaagaggcatcgaaataattcagaatgctctcaaggcacct
acgtctacaatagtatcaaacgctggatttaatgcgcctgtggttcttggcaaattgttg
gagcaagatgatcataatttgggttatgatgctgctaaaggtgagtatgttaacatggtc
caggctggaatcatagatccccttaaagttatcaggacagcgctggtagatgctgccagt
gtttcattgctattgacgacgacagaagcagctgtcgtagataacccaaatgagaaaaaa
ccgccaagccgtatgccagacatggatgccatggactattag
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