Ricinus communis (castor bean): 8267130
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Entry
8267130 CDS
T01087
Name
(RefSeq) transcription initiation factor TFIID subunit 12 isoform X1
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
8267130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcu03021
]
8267130
03036 Chromosome and associated proteins [BR:
rcu03036
]
8267130
Transcription machinery [BR:
rcu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
8267130
Coactivators
SAGA/TFTC/STAGA complex
8267130
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
8267130
STAGA complex
8267130
TFTC complex
8267130
SAGA complex
8267130
SLIK complex
8267130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
Motif
Other DBs
NCBI-GeneID:
8267130
NCBI-ProteinID:
XP_048225650
LinkDB
All DBs
Position
10:complement(16191639..16198099)
Genome browser
AA seq
558 aa
AA seq
DB search
MDNQAPSPSTTTTSLPSQPSPQPQPQPQQPLQQPPSPALQSPAPPQQQQPQLLQQQQQPT
PASQPQSASAVPASPSQKPNPNPKPSASTTTTTTTPLITQPQSQPHTTSTTTATNTRPPQ
LHRPWPNPHPHFSHFSSIPSSSSSPSVSPPIPATLQPRGGVGGVTIGVPAPSPGPPFTST
LGQQFTANSQVRPGMGMMGSMNTSSSQIRANHQQRPALQSPVLRPSNNHSSTTHNFQGQG
YIRPSLVGSGSPAPNTSQNLQSPNQPWLSSGSQGKPPLPSPSYRPQINSPSSLQQRSHIP
QQHQSLPTNSQQQHMSPSQPHQSLTSHPPSEHLGQQFPPTRGPRSITQQLALQSLPNQKP
SSLAVVHPSPVANTVSNTVQPGTLNRTAIPESDESGNRILSKRNIHELVTQIDPSEKLDP
EVEDILADIADEFVESVSIDNLCTCLLVHVMHIRMITTFGCSLAKHRKSDTLEAKDILLH
LERNWNMTLPGFSGDEIKTYRKPLTSDIHKERLAVIKKSILASDMASAKSSVGQAAGNAK
SNLTRTPANAMISPNLKI
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggacaatcaagccccatctccctccactaccaccacttcgctgccttctcaaccatca
ccgcagccgcagccgcagccgcagcagccactgcagcagcctccatccccggcacttcaa
tcgccagcaccacctcagcagcagcagccgcagctgctgcagcaacaacaacaaccaaca
cctgcatctcaaccgcaatccgcgtcggccgttcctgcaagcccttctcaaaaacctaac
cctaaccctaaaccctcagcttctactactacaactactactactccactcattactcag
ccacagtctcaaccacacacaacctctactactactgctactaatactaggccaccacaa
ctgcatagaccatggccaaacccacatccacacttttcacatttctcttctattccttct
tcttcatcttctccctctgtttcgcctccaattcctgctactctccagccaaggggcggc
gtaggtggcgttactattggtgttcccgccccttctcctggtcctccttttacctctact
cttggacagcagttcacggctaattcgcaggtgaggccaggaatggggatgatgggatca
atgaatacatcaagttcccaaattagggcaaatcatcaacagagaccagcacttcaatca
cctgttcttagaccatctaataatcactcttctaccacccataatttccaaggtcagggt
tatatcagaccctctctggtaggttctggttctccagcaccaaacacatcacaaaatttg
cagtcccctaatcagccatggttgtcgtcaggatctcaaggcaaacctccactgccgtcc
ccatcatatagaccacagataaactcaccatcttctttgcaacaaagatcgcatattcct
cagcaacatcaatcccttccaacaaattcacagcagcagcacatgtcaccttcacaacca
catcagtccttaacatcacatccaccatctgaacatcttgggcaacaatttccaccgaca
aggggtccacggtccataacacaacagcttgctcttcaatctttacctaatcaaaagcct
tcatccttagccgtggttcatcccagccctgtagccaacaccgtgtcaaatactgtacag
ccagggactctgaatagaacagctattccagaaagtgatgaatctggtaaccgcattctt
agcaaaagaaatatccatgagctagttacccagattgatccatctgagaaattagatcct
gaagttgaagacattcttgcggatatagctgatgaatttgttgaatctgtgagtatagac
aacctatgcacgtgtttgcttgtgcatgtgatgcacatacggatgattacaacatttggt
tgctcactggccaagcatcgaaaatccgatacactggaagcaaaagacatacttctacat
cttgagagaaactggaatatgacacttccaggatttagtggtgatgagatcaagacctac
cggaaaccgcttacaagcgatattcataaggaacgccttgcagtgataaagaagtcgatc
ttggcatctgacatggctagtgctaaaagctctgttggacaagctgctggaaatgcaaag
agcaatctgacaaggacacctgcaaatgccatgatctctcctaacttaaaaatttga
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