Ricinus communis (castor bean): 8267304
Help
Entry
8267304 CDS
T01087
Name
(RefSeq) long chain acyl-CoA synthetase 1 isoform X3
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00061
Fatty acid biosynthesis
rcu00071
Fatty acid degradation
rcu01100
Metabolic pathways
rcu01212
Fatty acid metabolism
rcu04146
Peroxisome
Module
rcu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
8267304
00071 Fatty acid degradation
8267304
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
8267304
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rcu01004
]
8267304
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcu04147
]
8267304
Enzymes [BR:
rcu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
8267304
Lipid biosynthesis proteins [BR:
rcu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
8267304
Exosome [BR:
rcu04147
]
Exosomal proteins
Exosomal proteins of breast milk
8267304
Exosomal proteins of breast cancer cells
8267304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
8267304
NCBI-ProteinID:
XP_015572372
UniProt:
B9RNA5
LinkDB
All DBs
Position
1:complement(8746101..8753322)
Genome browser
AA seq
660 aa
AA seq
DB search
MKVFAVEVEEGREGKDGNPSVGPVYRNVLSKNEFPAPDCDMDTAWDLFSVSVKKYPENKM
LGWRKFVNGKVGPYVWKTYKEVYEEVLQIGSALRASGAEPGCRVGIYGSNCPQWIVAMEA
CSAHSLVCVPLYDTLGPNAVNFIVDHAEIDFAFVQDKKVKELLNPDCGSASRLKTVVCFT
SLTEEEKDKAEQIQIKPYSWEEFLRLGKENPSETSPPHPFSICTIMYTSGTSGDPKGVVL
THEAVMSFLRSVDLFMEQFEDKMTVDDVYLSFLPLAHILDRMIEEYFFRKGAAVGYYHGD
LNALKDDLMELKPTFLAGVPRVFEKIHEGIKKALEELNPVRRRIFDALYKYKLYWMNLGY
KQKYASPLADLLAFRKVKAKLGGRLRLIISGAAPLSTEVEEFLRVTCCAFVVQGYGLTET
CGPVTIGFPDEMCMMGAVGAVCVCNELRLEEVPEMGYNPLGNPPRGEICVRGKTLFSGYY
KNPELTRECMKDGWFHTGDIGEIHPNGVVKIIDRKKHLIKLSQGEYIALEYLENVYSITP
IVEDIWVYGDSSKPMLIAVVALNEENTKKWAYLNGFLDSFSALCSLDQLHEYVLSELKST
AERNKLRGFERIKGAILESRPFDMERDLVTATLKKKRNKLLSYYQLEIDQLYKTLGGKRG
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtttttgctgttgaggttgaagagggaagggaaggaaaagatggaaatccgtcc
gttggtcctgtgtaccgaaatgtactatctaaaaacgaatttcctgcacctgattgtgat
atggatacagcatgggatctcttcagtgtatctgtaaagaagtatcctgaaaataaaatg
cttggttggcgtaaatttgtcaacgggaaggtggggccttacgtatggaaaacatacaag
gaagtgtatgaagaagttctgcaaattggctctgcattgcgggcctctggtgctgaacct
ggctgccgagttggaatatatggatcaaactgtcctcaatggattgtggcaatggaggct
tgcagcgcccacagcttggtttgtgtgcctctctatgatacccttgggccaaatgctgta
aattttatagtagaccatgcagagattgatttcgcttttgtccaagataaaaaagtgaaa
gaattactgaatccagattgcggatctgcttcacggctgaaaactgttgtttgctttacg
tcattgactgaggaagagaaggacaaggcagaacaaatacagataaaaccttactcttgg
gaagagtttctccgtttgggaaaagagaatccctcagaaacatcgccacctcatcctttt
agcatttgcacgataatgtacacgagtggaactagtggagatcccaaaggtgttgtctta
actcatgaagcagtgatgagttttctaagaagcgttgatctatttatggaacaatttgaa
gacaagatgacagttgacgatgtatatctatctttcctccctcttgctcatatactggac
cgcatgattgaggagtacttcttccgaaaaggtgctgctgttggctactatcatggggat
ttgaatgcactgaaagatgatttgatggagttgaagcccacatttttagctggcgtacct
cgagttttcgaaaaaatacacgaaggtataaagaaggcattagaagaactgaatcctgtc
cgcagacgaatttttgatgctctctataaatacaaactgtattggatgaatcttggatac
aaacagaaatatgcttcaccactagcagatttgttagccttcagaaaggtcaaagctaag
ttaggtggccgtcttcgactaatcatatctggagctgcacccctgagtactgaagtggaa
gaattcttaagggtcacttgctgtgctttcgtggtccaaggctatggattgacagagacc
tgtggaccagtcaccattggcttcccggatgaaatgtgcatgatgggtgctgttggggct
gtatgtgtgtgcaatgagttgcgcctagaggaggttccagagatgggctacaatccgctc
gggaaccctcctcgtggtgagatatgtgtgagaggaaagactctcttttctgggtactac
aagaatcctgaactaacaagagaatgcatgaaagatggatggttccatacaggggatata
ggagaaattcatccgaatggagttgtaaagattatcgataggaaaaaacatctaattaaa
ctttcacagggagaatatatcgcactggagtacttggaaaatgtttacagtatcactcca
attgttgaagacatatgggtttacggagacagctccaagccgatgctaattgcagtagta
gcactcaatgaagaaaacacaaaaaagtgggcatatttaaatggttttctggattcattt
tctgcactttgttctcttgatcagctacacgaatatgtcctctcagaactgaagtctaca
gctgaaagaaacaagcttaggggttttgaacgtataaaaggagcgattttggagtctcgc
cctttcgatatggaaagagatttagtgactgcaacactgaagaagaaaagaaataaattg
ctaagctattatcagctggaaattgatcaactttacaaaactttgggagggaaaagaggg
taa
DBGET
integrated database retrieval system
