Ricinus communis (castor bean): 8267446
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Entry
8267446 CDS
T01087
Name
(RefSeq) starch synthase 3, chloroplastic/amyloplastic
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00500
Starch and sucrose metabolism
rcu01100
Metabolic pathways
rcu01110
Biosynthesis of secondary metabolites
Module
rcu_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
8267446
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rcu01003
]
8267446
Enzymes [BR:
rcu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
8267446
Glycosyltransferases [BR:
rcu01003
]
Polysaccharide
Storage polysaccharide
8267446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
CBM53
Glyco_transf_4
Glycos_transf_1
Glyco_trans_1_4
Glyco_trans_4_4
Motif
Other DBs
NCBI-GeneID:
8267446
NCBI-ProteinID:
XP_048230219
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All DBs
Position
5:31500654..31511665
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AA seq
1141 aa
AA seq
DB search
MEVGLAVQKPVSCSRAVFHQRTLFNIKPFLGSFPHVKSSNFSCFHLTSWGNKYPTSGVSL
IVAAAADFSKRRRRKMSTAKSRGPAPEGFTLKTPAGTSTQKRNLQNNGDKEDSVTLTSSE
IVGTNKKTPETKDHIDEEQEFELTVDKKVIEEKVTEDVPLSLAKSNQAMENGSVGNVGNV
NMSADEIAREERQFDNLKSDRFVKEEGFGTDDKEIEDTSLKLKLEMEEKRKQEIEGLAEY
SFSRGNKLFIYPLVVKPDQDIEVYLNRSLSTLNNEPDVFIMGAFNDWRWKSFTIRLNKTH
LKGDWWSCQVHVPKEAYKMDFVFFNGKNVYDNNDKKDFCTAVEGGMDALAFDDFLLEEKR
RELDKLAKEQAERERQAEDQRQREVEKAASEADKAHAKVEIEKRREILHQSMKKASSPID
NVWYIRPTEFKGEDLVRLYYNKSSGPLAHAKDIWIHGGCNNWSDGLSIVEKLICSERKDG
EWWYAKVLVPDRAIILDWVFADGPPQSAIVYDNNQRQDFHAIVPKSVPTELFWVEEEHRI
YRKLQEERRLREEAIRAKAEKTAHMKAERKERTLKRFLLSQKHIVYTDPLDVQAGKDATV
FYNPANTVLNGKSEVWFRGSFNRWTHRNGPLPPLKMVSADNGSHVKATVKVPLDAYMMDF
VFSEKEEGGTFDNKDGVDYHVPVFGGIAKEPPMHIVHVAVEMAPIAKVGGLGDVVTSLSR
AVQDLNHSVDIILPKYDCMNLTHVKDIHYQKSYSWGGTEIKVWFGKVEGLSVYFLEPQNG
MFWTGCIYGCRNDGERFGFFCHAALEFLQQSGFHPDIIHCHDWSSAPVAWLFKDHYMHYG
LSKARVVFTIHNLEFGANNIGRAMAYSDMATTVSPTYSREVAGNSAIAPHLHKFHGILNG
IDPDIWDPYNDKFIPVAYTSENVVEGKRAAKEALQQRLGLKKADLPLIGIITRLTHQKGI
HLIKHAIWRTLDRNGQVVLLGSAPDPRIQNDFVNLANQLHSSHADRARLCLTYDEPLSHL
IYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQAQGLEP
NGFSFDGADAAGTDYALNRAISAWYDGRGWFNSLCKTVMQQDWSWNKPALDYMELYHAAR
K
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgggtttggcagtacagaaacccgtcagttgtagtcgggctgtttttcaccag
agaacccttttcaatatcaagccatttctcgggtcttttcctcatgttaaatctagcaac
ttttcatgttttcatcttacttcatggggcaacaaatacccaacaagtggagtttcactc
attgttgctgctgctgcagatttttctaagaggagacggagaaaaatgtcaacggcaaag
tctagaggtcctgctccagaaggattcacactgaaaactcctgcaggaacaagcacccag
aagagaaatttacagaacaatggagataaagaggattcagtaactctcacttctagtgag
attgtgggtaccaacaagaaaacacctgaaactaaagatcacatagatgaagaacaagaa
ttcgaacttactgtggataagaaggttattgaagaaaaggtaacagaagatgtaccgttg
tcccttgctaaaagcaatcaagccatggaaaatggaagtgttggtaatgttgggaatgtg
aatatgtcagctgatgaaattgctagagaggaaagacagtttgacaatttaaagagtgat
cgctttgtaaaagaggaaggttttgggactgatgacaaagaaattgaagacacttctcta
aaattaaagttggaaatggaagaaaaacggaaacaagaaattgagggtctagctgagtat
agtttctcaaggggtaacaaattatttatttatcccctggttgtgaaacctgatcaagac
atagaagtataccttaataggagtctatccacactgaataatgaaccagacgtttttatt
atgggagccttcaatgactggagatggaaatcttttacaataaggttgaacaagacacat
ctaaaaggggattggtggtcttgccaggttcatgttccgaaagaagcatataaaatggat
tttgtgtttttcaatgggaaaaatgtctatgacaataatgacaaaaaggacttctgcaca
gctgtggaaggtggaatggatgcattagcatttgatgatttcttgcttgaggaaaagcga
agggagctagacaaacttgcaaaggagcaagctgagagggaaagacaagcagaagaccag
aggcaaagagaagtggagaaggctgcaagtgaagctgataaagcacatgcaaaggtagaa
attgaaaagaggcgagaaatattgcatcagtcgatgaaaaaagcttcaagtcctattgat
aatgtgtggtatattaggcctactgagtttaaaggtgaggacctggtccgattatattat
aacaaaagttcaggtcctcttgcccatgccaaggacatctggattcatgggggatgtaat
aactggagtgatgggttgtcaattgttgaaaagctcatttgctctgagagaaaggatggt
gaatggtggtatgctaaggttcttgtaccagatagagccatcatcttggattgggtcttc
gctgatggtccacctcagagtgctatcgtgtatgataacaatcagcgccaagatttccat
gcaattgtgccaaaatccgttcctacagaattgttttgggttgaggaagagcaccgtata
tataggaaactacaggaagaaaggaggctaagagaggaggcaatacgcgccaaggctgaa
aaaacagcacatatgaaagctgaaagaaaggagagaactttgaaaaggtttctgctgtct
cagaagcatatagtttatactgaccctcttgatgttcaggcaggaaaagatgcgacagtt
ttttacaatcctgctaacacagttctcaatggtaaatctgaagtttggttcagaggttca
tttaatcgttggactcaccggaatggtccattgccacctctgaaaatggtatccgcagat
aatggttctcatgtcaaagctactgtcaaggttccattagatgcatacatgatggatttt
gtattctcggagaaggaagaaggtggaacttttgacaataaagatggcgtggactaccat
gtacctgtgtttggggggatcgcgaaggagccaccaatgcatattgtgcatgttgctgtt
gaaatggccccaattgcaaaggttggaggacttggtgatgttgtgactagtctctcacgt
gctgtccaagatttaaatcatagtgtggacatcattcttcccaagtatgactgcatgaac
cttacccatgtgaaggacattcattatcagaaaagctattcctggggtggtacagaaata
aaagtatggttcggaaaggtggaaggtctttctgtctactttctggagcctcaaaatggg
atgttttggactggttgcatatatggctgccgcaatgatggggagagatttggtttcttt
tgtcatgcagctcttgagttcttacaacaaagtggatttcatcctgacattatccactgt
cacgattggtctagtgctccagttgcatggctttttaaagaccactacatgcactatggt
cttagcaaagctcgggttgtctttacgattcataaccttgaatttggggcaaacaacatt
ggcagagctatggcatactctgacatggctacaactgtatcccccacatattcaagggag
gttgctggaaattctgcaatagctcctcatcttcacaaattccatggtatactgaatgga
attgacccagacatatgggatccttataacgataagttcattcctgtagcttatacatct
gagaatgttgtcgaagggaaaagagctgcaaaggaggctttgcagcaaaggcttggttta
aagaaagctgatctgcctttaattgggattattactcgcctgacacatcagaaaggaatc
catctcatcaagcatgcaatttggcgaaccttagatcgcaatggacaagtcgtattgctt
ggttctgctccagatcctcggattcagaatgattttgtgaacttggccaaccaattgcat
tcttctcatgctgaccgtgctcgcctttgtttgacttatgatgagccactctcgcacttg
atatatgcaggtgctgatttcattctagtcccatcaatttttgagccatgcggactgacg
caacttactgctatgagatatggttcaatacctgttgttcgaaaaactggaggactttat
gatactgtatttgatgttgatcatgataaagagagagcacaagcacaaggtcttgaacct
aatggatttagttttgatggagctgatgctgctggcactgattatgctttgaatagggca
atttctgcatggtatgatggacgggggtggtttaactcattatgcaaaacggtgatgcag
caagactggtcttggaataaacctgctcttgattacatggagctttaccatgcggcacgc
aagtga
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