Ricinus communis (castor bean): 8267671
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Entry
8267671 CDS
T01087
Name
(RefSeq) SNW/SKI-interacting protein
KO
K06063
SNW domain-containing protein 1
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8267671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcu03041
]
8267671
Spliceosome [BR:
rcu03041
]
Complex B
Other components
Prp19-related factors
8267671
Complex C
8267671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
8267671
NCBI-ProteinID:
XP_002530607
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Position
7:4636061..4638907
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AA seq
603 aa
AA seq
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MAALREILPPVKSTTTTYYDHSNDPWFKQRFTSSEAEQATVISHKPVPPYLDRKGFVPRK
VEDFGDGGAFPEIHIAQYPLGMGRDKSAKPASKILPLTVDAHGNVAYDAIVKQNENSKKI
VYSQHKDLIPKLLKNDEESDEDEDLQKEIEETTQETKAALEKIVNVRLSAAQPKNVPTQS
SDSKYIKYKPSQQSAAFNSGAKERIIRMVEMPVDPLEPPKFKHKRVPKASGSPPVPIMHS
PPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQDVQINDNFAKLSEALY
VAEQKAREAVAMRSKVQKEMMMKEKERKEQELRALAQKARSERTGAAPPVSAPIPSNKTA
MNDVDMIGDHDRGRDRGKDAPKETREEREERLQREKIREERRRERERERRLEAKDAAMGK
KSKITRDRDRDISEKVALGMASTGAARGGEVMYDQRLFNQEKGMDSGFATDDQYNVYDKG
LFTAQPTLSTLYRPKKDVDSDMYGGADEQLDKIMKTDRFKPDKAFAGTSEKAGPRDRPVE
FEKDAEEADPFGLDQFLTEVKKGKKAMDKVGSGGTMRASGGSSTRDGYDGGSGRTRIGFE
RGR
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggcagctctgagggagattttgcctccagttaagtcaactactacaacttattatgat
cattcaaatgacccatggtttaagcaaagatttacctcatcggaggcagagcaagctact
gtaattagccataaacctgtacctccttacttggatcgtaaaggttttgttcctcgaaag
gtggaggattttggcgatgggggtgcattcccagagattcatattgcacaatatcctctt
ggcatgggtagggataagtctgcaaaacctgcgtcaaaaatcttgcctttgactgttgat
gcacatgggaatgttgcatatgatgcaattgtgaagcaaaatgagaattcaaaaaagatt
gtttattcacaacataaagatttgatcccgaagcttttgaagaatgacgaggagagtgat
gaggatgaggatttgcagaaagaaattgaagagacaacacaggaaacaaaagcagcactt
gaaaagattgttaatgtgagattgagtgcagcacaaccaaagaacgtgccgacacagtct
tctgattcgaaatatataaagtacaagccgtcgcagcaatcggcagcttttaattcaggg
gcaaaagaaagaataatcagaatggttgagatgccagtggacccactggagccgcctaag
ttcaagcataagagggttcccaaggcttctggatccccacccgtaccaatcatgcactcc
cctcctaggcccgtgacggtaaaagatcagcaggattggaaaattcctccgtgtatctca
aactggaagaatcctaaaggctatactatacctcttgataagcgtctagcagctgatgga
agaggtttgcaggatgttcaaattaatgataattttgcaaagctgtcagaggcactttat
gttgctgagcagaaggctagagaagctgttgcgatgagatctaaggttcaaaaggagatg
atgatgaaggagaaagaaaggaaagagcaagaactgcgagcactggctcagaaagcacgc
tctgaacgaactggcgcagcacctccagtatctgctccaatcccatctaataagactgca
atgaatgatgttgatatgataggggatcatgatcgtgggagagatagggggaaggatgct
cccaaagagacaagagaggaaagagaagagaggctgcagcgtgagaaaattcgcgaggag
cgacgtcgggaaagggagagggaaagaaggttggaggcaaaagatgctgccatgggtaag
aaaagcaagatcacaagagatagagatcgtgacatcagtgagaaggttgctcttggtatg
gcttctactggtgctgccagaggaggagaggttatgtatgaccagagattgtttaaccag
gagaaagggatggattctggttttgccacagatgaccaatataacgtgtatgacaagggc
ctatttacagcccagcctacactttcaacactctacaggcctaagaaagatgtcgattct
gatatgtatggaggtgctgatgagcagttagataagattatgaagacggacaggtttaaa
cctgataaggcttttgctggtacatctgagaaggccggtccacgggacaggccagttgag
tttgaaaaggatgcagaagaagctgatccatttggtttggatcagttcttgactgaagtg
aagaagggtaagaaagccatggacaaggtaggcagtggtggaacaatgagagctagtggt
gggtcttcaacacgagatggatatgatggaggctctggtagaactcgcatcggctttgag
aggggccgctag
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