Ricinus communis (castor bean): 8267675
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Entry
8267675 CDS
T01087
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 16
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rcu03009
]
8267675
Enzymes [BR:
rcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
8267675
Ribosome biogenesis [BR:
rcu03009
]
Eukaryotic type
Pre-60S particles
Helicases
8267675
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SecA_DEAD
AAA_22
KRAP_IP3R_bind
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
8267675
NCBI-ProteinID:
XP_015581730
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All DBs
Position
7:4610253..4616257
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AA seq
618 aa
AA seq
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MANTEEKPHESTQDDEIKEELEEIKEEEEEEEEEELSFEELGLDPRLIRALNKKEISIRK
PTPIQRVAIPLILEGKDVVARAKTGSGKTLAYLLPLLQKLFSDSGSKKKLAPSAFILVPS
GELCQQVYKEVSALIDWCKVQLKAVQLTSKMSGSDLRTAIAGPPDILISSPASLAKCLSV
GLLQSASINDSLEILVLDEADLLLSFGYEDDLRALTALIPRRCQCLLMSATSSDDVDKLK
KLMLHNPYILTLPEVEGNKDEAIPKNVQQFWISCSGRDKLVHILALLKLDLVQKKVLIFT
NSIDMSFRLRLFLEKFGIKSAILNAELPQNSRLHILEEFNAGLFDYLIATDDSETKEKEQ
EQADRNLAQSRKSKKSKQKLDSEFGVVRGIDFKNVHTVVNYDMPLNAAGYVHRIGRTGRG
YNSGSSVSLVSPDEMEILEDVKSFLGDDENKDSNIIAPFPLLTKNAVESLRYRAEDVAKS
VTKIAVKEARAQDLRNEILNSEKLKAHFEANPRDLDLLKHDKVLSKNPPAPHLRDVPDYL
MDATTKEASKMVKLARAAMGKNNPSRRQGSKKKFRKSKDPLKALSFQSQAPKKSDKGGMK
RERKDGDSTHKHKKGRTV
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggctaatactgaagagaaaccacatgaatcaacacaggatgatgaaatcaaagaggaa
ctagaggaaataaaagaagaagaagaagaagaagaagaagaagaattgagctttgaagag
ctagggttagaccctcgcttaattcgagccctaaacaagaaggaaattagcattagaaag
ccaactccaattcagcgtgtcgctattcctttaattttggaagggaaagatgttgttgca
agagcaaaaacaggttcaggaaagactttagcttacttgcttcctttgcttcaaaagcta
ttctctgattctggttcgaagaagaagcttgctccttctgcattcattcttgttccaagc
ggagagctgtgtcagcaggtttataaggaagtttcggctctcattgattggtgtaaagtt
caattgaaagctgtacagttgacaagcaaaatgtccggttctgatttgcggactgcaatt
gctggacctcctgatattcttatttcgagtcctgcttctttagctaaatgcttgtcagtt
ggtttacttcagtcagcttctataaatgattcacttgaaattcttgttcttgatgaggca
gatcttctgttgtcttttggatatgaagatgatttaagagctcttacagctcttattcct
agacgttgtcaatgtcttcttatgtctgcaacatcaagcgatgatgttgataaactaaag
aagctcatgctgcacaatccatacattttgactttgccagaagtagaaggtaataaggat
gaagctatccccaaaaatgttcagcaattttggatttcatgcagtggtcgtgacaagtta
gtccacattctcgctcttttgaagctggatctggttcagaagaaagtcctaatatttact
aattccattgacatgagttttaggctgagactgtttctggaaaagtttgggataaagtcc
gccatcttaaatgctgagttgccacagaattctcgccttcatatacttgaggaattcaat
gctggactttttgactatttaatagcaactgacgatagtgaaacaaaagagaaggaacaa
gaacaagctgataggaaccttgcccagtcaagaaagtctaaaaagtctaagcaaaagttg
gactctgaatttggagtagtgaggggcattgactttaaaaatgttcacacagttgtaaat
tatgatatgcctttgaatgcggcgggatatgtgcatcgaattggacgtactggaagggga
tacaacagtggttcttctgtctctttagtttctccagatgagatggaaattcttgaagat
gtaaaatcctttttaggggatgatgagaacaaggattcaaacattattgctccttttcct
ttacttactaagaatgcggtggagtctttacgatatagagcagaggatgttgcaaaaagt
gtcactaaaattgctgtcaaggaagcacgagctcaggatctgaggaatgaaatactaaat
tctgagaagttgaaggctcattttgaggctaatccacgggacctagatctattgaagcat
gacaaagtcctgagcaagaacccccctgctcctcacctacgtgatgtgcccgactatcta
atggatgcaacgactaaagaggcaagcaaaatggtgaagcttgctagagctgcaatggga
aagaataacccatcccgccgtcagggatccaagaaaaaatttaggaaaagtaaagatcct
cttaaggctctctcttttcagtctcaggcaccgaagaaatctgacaaaggcggaatgaag
agggagagaaaagacggcgacagtactcataaacacaaaaagggaagaactgtttga
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