Ricinus communis (castor bean): 8267785
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Entry
8267785 CDS
T01087
Name
(RefSeq) splicing factor 1
KO
K13095
splicing factor 1
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8267785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcu03041
]
8267785
Spliceosome [BR:
rcu03041
]
Complex A
Other components
Complex A specific factors
8267785
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
KH_1
SF1-HH
Motif
Other DBs
NCBI-GeneID:
8267785
NCBI-ProteinID:
XP_015581899
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Position
9:24140238..24146406
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AA seq
862 aa
AA seq
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MKNKMTADVDQTSPIELQKVKMSRKNASSDSSTTGPKMSIFAAKSGFIIPKNKLLGSLVP
VFKGGKKPGGNDAASEESTNQVLRKTKWGPDPTQDAAVKKGRALAYQTRVDQITQQLKSG
ILESGGAEDSEVADQHADPNLSSPKIDSKDLELLKLEWREVIGEILKLNPSYKAPPDYDP
LLKEATFPIPVKDHPRCNFVGLIFGPGGETQKRLEKETGARIHVLGTKANTGEKVEISPS
GGNDTQDAYEELNVHVSADTFEKVDGAIALIELLVTSVSGNLMDGNNMNFLNQSQGQSTP
FLLPTSDQGVGQSVVGSAQTPQQTQFQYHGLQFPGVLAQAPGHPRSFIPSHNSSAPIHNN
TLPVHSLPLNPTAMASMLGPQPLPASGLNLILQNTPLVPSRSQLPMQVPSHPYPPRNFSM
PTSQPSSAQTNILASFQFSGNQPPPAMLSPVSGSLASSLLRPVSTVPPGPQSDRPLNPLG
SSSGWSAAPTGVSASLGDTGQMVPPMISFQDPWPLAPQPGFLSSALPSNMPAANIVSSVS
FPSGPSTINIPINHPSGASSFASVPPPQMGSSSMAMLIQSSSVGMAAAPLTHASVGPVPG
RMPVALPMASTSQPTPQSGIIGSFPGHAVSSTPTRPPARGPNPLHSGPSDFTFQLHHSMN
PAAQLFPGPNNQSGAQDTRFPRPPIQPSSSQVSSFRMAVPNSISSPGMHSFSSPRIGNQM
GQTQAHMPPIPFAGSSTGTLMAPRVPAFSNASPIILQTRNFSPIPQLPNLAGPFPPRPPN
PLQVQPTYPAPITPRGNFIPPNQQSSRNLSFASGPGGQQIYDPFSPTSVSNMPQHQGDNL
VKGRKPEADPEYEDLMTSVGVK
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataagatgactgctgatgttgaccagacatctccaattgaactccaaaaagtt
aagatgtctagaaaaaatgcttcatctgattcatcaactactggtccaaagatgtccatt
tttgctgcgaagtctggatttatcataccaaaaaacaagcttttgggttcattagttcca
gtattcaaaggaggtaaaaagccaggaggcaatgatgcagccagtgaagaaagtaccaac
caggtgctgaggaagacaaaatggggccctgatccaacccaagatgctgcggtcaaaaag
ggaagagccttagcttatcagactcgagtggatcaaattacacaacagctgaagtcagga
attctagaatctgggggagctgaagactcagaagtagctgatcagcatgcagatcccaac
ttatccagtcccaaaattgactccaaggacttggaacttttgaaacttgaatggcgggaa
gttataggtgaaatactgaagctgaatccaagctacaaggctccacctgattatgatcct
ctattgaaagaggctacatttcctattcctgtcaaggaccatcctcggtgcaattttgtt
ggtctaatatttgggcctggaggtgagactcagaagcgattagaaaaggaaactggtgcc
agaatacatgtacttggaaccaaagcaaatacgggggaaaaggttgagatttctccctct
ggtgggaatgacacccaggatgcatatgaggagttgaatgttcatgtatcagcagacaca
tttgagaaagttgatggagcaattgccctgattgaattgctagttacctcagtatcagga
aatttaatggatgggaataacatgaattttcttaatcaaagtcaggggcaatctactcct
tttctactcccaactagtgaccagggagtggggcaatcagtcgttgggtctgcacaaact
cctcaacaaactcagttccaataccatggtctacagttccctggagtcttagctcaagct
ccaggacaccctcgtagcttcatccccagccataattcatcagcaccaattcataacaac
actttacctgtacattcattacctttgaatcctacagccatggcttcaatgcttgggcct
caaccacttccagcatctggattgaatctaattcttcagaacacaccccttgttccttcc
aggtcacagctgccaatgcaagttccatcacatccatatccaccaagaaatttctccatg
ccaacttcccagccgtcatctgctcaaacaaacattttggcttcatttcaattcagtggt
aaccaacctccaccagccatgctatctccagtttctgggtcattagcatcatcattgctt
cggcctgtatcaactgttccacctggaccgcaatctgacaggccactgaaccctctgggg
agctcttccggatggtctgcagctcctactggtgtttcagcttctttaggtgatacaggg
caaatggttcctcctatgatctcttttcaggatccttggcctttggctccacaaccaggt
tttctgtcctctgcactaccttcaaacatgccagcagctaatatagtttcttccgtatca
tttccatctggtccatccactatcaatattcctatcaatcatccgagtggagcctcgagt
tttgcttctgttccaccccctcaaatgggttcttcctccatggctatgctaatccaatct
tcatcagtgggcatggctgctgcacccctaactcatgcatcagtaggccctgtacctgga
aggatgccagttgcattaccaatggcatccacatcacaaccaactccacagtctggaatt
ataggatctttccctggacatgcagtaagttctactcccacaagaccaccggcaagaggt
ccaaatcctctgcattcaggtcccagtgattttacttttcagcttcatcattcaatgaat
ccagctgctcaattatttcccgggccaaacaatcagtctggagctcaagatacccgattt
cctagacctccaattcagccatcatcatctcaagtttcatctttcaggatggctgtgccc
aattcaatttcttcacctggcatgcattcgttctcaagcccaagaataggcaatcagatg
ggtcaaactcaggctcacatgcctcctatcccctttgctgggagctctacagggaccttg
atggcacccagagtgccggcattttcaaatgcaagtccaattatactacaaactaggaat
ttcagtccaattccccaactaccgaacttggctggcccttttcctcccaggccaccgaat
cccctgcaagttcagccaacttatccggctccaataactcctagaggcaatttcattccc
cctaatcagcaatccagtaggaacctctcttttgcatcaggtcctggaggccagcaaatt
tatgatccattctcacccacttctgtttctaatatgcctcaacatcaaggagataatctg
gtcaagggaagaaaaccagaggctgatcctgagtatgaagatttgatgacctcagttgga
gtaaagtaa
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