Ricinus communis (castor bean): 8268115
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Entry
8268115 CDS
T01087
Name
(RefSeq) valine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
8268115
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rcu01007
]
8268115
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcu03016
]
8268115
Enzymes [BR:
rcu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
8268115
Amino acid related enzymes [BR:
rcu01007
]
Aminoacyl-tRNA synthetase
Class I (U)
8268115
Transfer RNA biogenesis [BR:
rcu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
8268115
Prokaryotic type
8268115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
tRNA-synt_1g
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
8268115
NCBI-ProteinID:
XP_048229775
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All DBs
Position
5:3983925..4005643
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AA seq
974 aa
AA seq
DB search
MALQVGLSSPFLLSSCSAHRLNPLIFSQRRRFIPLSNWRFYCQRPRFFAVAASENGVFTS
PEIAKSFDFSSEERIYNWWESQGYFKPNFERGSDPFVIPMPPPNVTGSLHMGHAMFVTLE
DIMVRYNRMKGRPTLWLPGTDHAGIATQLVVEKMLASEGIKRTELGREEFVQRVWEWKEK
YGGTITNQIKRLGASCDWTREHFTLDEQLSRAVVEAFIRLHEKGLIYQGSYLVNWSPNLQ
TAVSDLEVEYSEEPGTLYHIKYRVAGGSRGDFLTVATTRPETLFGDVAIAVHPKDDRYSQ
YIGRMAIVPMTYGRHVPIISDRHVDKDFGTGVLKISPGHDHNDYLLARKLGLPILNVMNK
DGTLNEVAGLYCGLDRFEARKKLWSDLEETGLAVKKEPHTLRVPRSQRGGEIIEPLVSKQ
WFVTMEPLAEKALRAVEKGELNILPERFEKIYNHWLSNIKDWCISRQLWWGHRIPVWYID
GKNCEEDYIVARDADEALAKAHEKYGKDVNIYQDPDVLDTWFSSALWPFSTLGWPDASSE
DFKKFYPTTMLETGHDILFFWVARMVMMGIEFTGTVPFSNVYLHGLIRDSQGRKMSKTLG
NVIDPLDTIKDFGTDALRFTLALGTAGQDLNLSTERLTANKAFTNKLWNAGKFILQNLPR
QTDKSAWETVLAYEFDKDESFLKLPLPECWVVSKLHLLIDMVTISYDKYYFGDVGRETYD
FFWSDFADWYIEASKARLYRSGGGSDASVAQAVLLYVFENVLKLLHPFMPFVTEELWQAL
PRRKEALIVSSWPQISLPRNANTIKKFENFQALTRAIRNARAEYSVEPAKRISASIVASE
EVIQYISTEKEALALLSRLDLQNVFFTDSPPGDANQSVHLVASEGLEAYLPLADMVDISA
EVDRLSKRLSKMQSEYDGLVARLKSPKFVERAPEDVVRGVREKAIEAEEKINLTKNRLAL
LKSSVLIPSDVKPS
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcactccaagtggggctctccagtccatttcttctatcctcttgctctgctcacaga
ctcaatcctcttattttctctcagcggcgtcgtttcattcctttatccaattggcgtttc
tactgtcaaaggcctagatttttcgcagttgcagcatcagaaaatggtgtatttacttct
ccagagattgcaaagtccttcgatttttcttcagaggaacggatatacaattggtgggag
tctcaaggatactttaagccaaattttgagcgtggaagtgatccttttgtgataccaatg
ccacctcctaatgttactggttcactgcatatgggacatgcaatgtttgtgacacttgag
gatatcatggttagatacaaccggatgaagggtagaccaacactgtggcttcctggaact
gatcatgctggtattgcaacacagttggttgtagaaaaaatgcttgcttctgaaggaata
aaaaggactgaactgggcagagaagagttcgtacaacgagtctgggaatggaaagagaag
tatggtggaactatcacaaatcagatcaagagacttggtgcttcctgtgattggacgaga
gagcactttacccttgatgagcagctaagtcgtgcagtggttgaggcctttatcaggctt
catgagaaaggtttaatctatcaagggtcttacttggttaattggtctcctaatctgcag
actgctgtttcagacttggaagtggaatattctgaagaacctggtactctatatcacatc
aagtaccgcgttgctggaggttcaaggggtgactttttgacagtagcaacgacacgcccc
gagacattatttggtgatgtcgccattgctgtgcatcctaaggatgatcgttattctcag
tacataggaagaatggcaattgtacctatgacatatggccgccatgttcctattatctct
gacaggcatgttgataaagactttgggactggtgtattgaagataagccctggacatgac
cataatgattaccttcttgctagaaagctgggtctcccaatacttaatgtgatgaataaa
gatgggacccttaatgaggttgctggactgtactgtggacttgatcggtttgaggctcgg
aagaaactatggtcagatcttgaggagacaggtcttgcagtgaaaaaggagccacacact
ttacgagttcccagatcacaacgtggtggagaaattattgagccattggtaagcaagcaa
tggtttgtaaccatggagcccttggctgagaaggcccttcgtgcagttgaaaaaggagaa
ttaaacattctgcctgaaaggttcgagaagatttataatcactggctatcaaacatcaag
gattggtgtataagcagacaactatggtggggacaccgcatacctgtttggtacattgat
ggaaagaactgtgaagaagattatatagttgctagagatgctgatgaagcccttgcaaaa
gcacatgagaagtatggaaaagatgtaaacatatatcaagatccagatgttcttgacaca
tggttttcaagtgcactatggcctttcagtacacttgggtggccggatgcatcatcagag
gattttaagaagttttatccaacaaccatgcttgaaactgggcatgacattttgttcttt
tgggtggcaaggatggtcatgatgggaattgaattcactgggactgttccattttcaaat
gtttatcttcatgggcttatccgggactcacaaggacgaaaaatgtctaaaaccctaggg
aatgtaatagatccccttgacacaatcaaggattttggcactgatgctttacgatttact
cttgctttaggaactgctgggcaggaccttaacttgtctactgagaggttgactgccaac
aaagccttcactaataaactgtggaatgctgggaagtttatattgcaaaatttgcctagg
caaactgataaatctgcttgggaaactgtgctggcttatgagtttgacaaagatgagtcc
ttcctcaagctacctttgccagaatgctgggtggtctcaaaacttcatttactaattgat
atggtcaccataagctatgacaagtactactttggagatgttggaagagaaacctatgat
ttcttctggagtgattttgctgattggtatatagaagcgagtaaagctcgtctttaccgt
tctggaggcggttcagatgcatcagtggcacaggcggttctattatatgtttttgaaaat
gtattgaagctgctacatccattcatgccatttgtcactgaagaactctggcaggcactc
ccacgacgcaaagaagctcttatagtatcctcttggccccagatttcacttccacggaat
gctaatacaattaaaaaatttgaaaatttccaagcattgaccagagcaatccggaatgct
agagctgagtactctgttgagccagctaaacgtatatctgcatctatagtagcaagtgaa
gaagtcatccagtatatatctacagagaaggaagccttagctcttctatccaggctagat
ctacaaaacgtttttttcacagattctcctccaggggatgcaaatcaatcagtacacctt
gttgccagcgagggactagaggcatatcttcccttagctgatatggttgatatatctgct
gaagttgaccgcctttcaaagcgcctttccaagatgcaatcagagtatgatgggcttgta
gctcgcctcaagtctccaaaatttgtagagagagctcccgaggatgttgttcgcggggtt
cgagagaaagcgatagaagcagaagagaagataaaccttaccaagaaccgtttagctctc
ctcaagtcctcagttttgatcccttctgatgtgaagccgtcttag
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