Ricinus communis (castor bean): 8268116
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Entry
8268116 CDS
T01087
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 7, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00900
Terpenoid backbone biosynthesis
rcu01100
Metabolic pathways
rcu01110
Biosynthesis of secondary metabolites
Module
rcu_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
8268116
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rcu01006
]
8268116
Enzymes [BR:
rcu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
8268116
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
8268116
2.5.1.29 geranylgeranyl diphosphate synthase
8268116
Prenyltransferases [BR:
rcu01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
8268116
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
8268116
NCBI-ProteinID:
XP_002531191
UniProt:
B9SYX2
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All DBs
Position
5:complement(3968584..3969918)
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AA seq
372 aa
AA seq
DB search
MAFSATIPSCETSLLLKKSSFNGLKNHSKVPLANLKFLVPAKTKLTATATRVMVVSNSSA
AAAAQEPIKIIAPKIPLPAFPFEEYMATKAKHVNKALDEAIPLQNPVKIHDAMRYSLLAG
GKRVRPVLCIAACELVGGDEATAMPAACAMEMIHTMSLIHDDLPCMDNDDLRRGKPTNHK
MFGEETAILAGDALLSFSFEHVARSTKNVSPDRVVRAIAELGSAVGSEGLVAGQIVDIDS
EGKDVSVSDLEYIHIHKTAKLLEASVVCGAILGGADDESVERVRKYARCIGLLFQVVDDI
LDVTKSSEELGKTAGKDLITDKATYPKLMGIDEARKLAAKLVDQANQELAYFDSAKAAPL
YHFANYIASRQN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggccttctcagcaaccatccctagctgtgaaacttcactacttctcaagaagtcatcc
tttaatggcctcaagaaccattccaaagtcccacttgccaacctcaagtttctggttcct
gccaaaacaaaactcaccgccaccgccaccagggtgatggtggtttcaaactcctccgcg
gcagcggcagctcaggaacccatcaaaataatcgcaccaaagatccctctccctgcattc
ccatttgaagaatacatggcaaccaaagcgaaacacgttaacaaggcattagatgaggca
attccacttcagaatccagtaaaaatccatgacgccatgagatactctcttctagcagga
gggaaacgcgtaaggccagttttatgtatagctgcttgtgaattagtaggaggagatgag
gcaacagctatgccagcagcatgcgcaatggaaatgatccatactatgtcactaatccac
gatgatcttccctgtatggacaacgatgatcttcgacgaggaaaacccactaaccacaag
atgtttggtgaagaaacagcaattcttgcaggcgatgcacttctttctttctcttttgaa
catgttgccaggtcaaccaagaacgtttcgcctgacagagttgttagagccatagccgaa
ctcggttcagcggttggatcggaagggttagtcgcagggcagatagtggatatcgacagt
gaaggtaaagacgtcagtgttagtgatttggagtatattcatattcacaagaccgccaag
cttttagaagcatcagttgtctgtggggcgatactgggaggagctgatgatgaaagtgtg
gaaagggttaggaaatatgcaaggtgtatcgggctgctgtttcaagttgttgatgatatt
ttggatgtgaccaagtcatcggaagagctgggaaagacggccggcaaggatttgatcacc
gataaggcgacatatccaaagcttatgggaatcgatgaggctaggaaacttgctgctaag
ttggtagatcaagctaatcaagaacttgcttattttgattctgctaaggctgctccatta
taccattttgctaactatattgccagccgacaaaattaa
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