Ricinus communis (castor bean): 8268179
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Entry
8268179 CDS
T01087
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rcu01009
]
8268179
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcu03021
]
8268179
Enzymes [BR:
rcu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
8268179
Protein phosphatases and associated proteins [BR:
rcu01009
]
HAD phosphatases
Fcp/Scp phosphatases
8268179
Transcription machinery [BR:
rcu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
8268179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
8268179
NCBI-ProteinID:
XP_002521936
UniProt:
B9S7G7
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Position
1:31096446..31103475
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AA seq
645 aa
AA seq
DB search
MAKEESVSVKDTVYKLQLSLLEGIENEDQLLAAGSLMSRSDYEDVVVERSIANLCGYPLC
NNSLPSDRPYKGRYRISLKEHRVYDLQETYMYCSSSCLVNSRAFSESLQEKRCSVLNPIK
LNEILRKFNDLTLDSEGLGRSGDLGLSNLKIQEKSETNVGKVSLEEWIGPSNAIEGYVPQ
GDRDPNPSLKNHKEGLKAICKKPVSKQDCFFSDTDFTSTIITNDEYSISKGPSGLTSTAS
DIKLQAQTGKGHEGLNAQLSSLRKQDSIKASRKSKGRRKEKVIKEQLNFQDLPSSSYYTA
EAEDISQATGAANLNESVLKPSLKSSGAKRSNRSVTWADERVDNAGSRNLCEVQEMEQTN
ESHEISESANKGDDGHMLRFESAEACAVALSQAAEAVASGDADVNKAMSEAGIIVLPPSQ
DLGQGGNVEKNDMIEQESASLKWPTKPGIPQSDLFDPEDSWYDAPPEGFSLTLSPFATMW
MALFAWVTSSSLAYIYGRDESAHEDYLSVNGREYPRKIVLRDGRSSEIRLTAESCLARTF
PGLVANLRLPIPVSTLEQGAGRLLETMSFVDALPAFRTKQWQVIALLFIEALSVCRIPAL
TSYMTSRRMVLHQVLDGAHISAEEYDIMKDFMVPLGRDPQARSGA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggaagaatcagtttctgtgaaagacactgtttataagttgcaactttccctt
cttgaaggcatagaaaatgaggaccagctactagcggctgggtctctgatgtctcgtagt
gactatgaagatgttgtcgttgagcgttcaattgcaaacctctgtggttatccactttgc
aacaattctctgccatcagatcgtccttacaagggtcgataccgcatttcattgaaggag
cacagggtttatgatctacaggaaacatacatgtattgctcttccagttgcctagtcaat
agtcgagctttctccgaaagcttacaggaaaagagatgctcagttttaaatccaatcaaa
cttaatgagattctgcggaagttcaatgatttgactttagattctgagggtttagggaga
agtggggacttagggttgtctaatttgaagattcaggagaagtcagaaaccaatgttggg
aaagtgtctttggaagagtggattggtccatcaaatgcaattgagggctatgttccacaa
ggagatcgtgatcccaatccttcattaaaaaatcataaagaaggattaaaagctatctgt
aagaaaccagtcagtaaacaagattgtttctttagtgacacggacttcacaagtactata
atcacaaatgatgaatatagcatttcaaaaggtccctctggcttgacaagcactgcctct
gacattaaattacaagcacaaacagggaaaggacatgaaggcttaaatgcccagttgtct
tctcttagaaagcaggactctattaaggcatcaagaaagtcaaaagggaggaggaaagaa
aaagtcataaaagaacaacttaactttcaagacctgccttcatcttcatattatactgct
gaagctgaagatatatctcaagctacaggagcagcgaatttgaatgaatcagtgctcaaa
ccctctctcaaatcttctggggcaaagagatctaatcgctccgtcacctgggctgatgag
agagttgataatgctggaagtagaaacctttgtgaggttcaggaaatggaacagacaaat
gaaagtcatgagatttcagagagtgcgaacaagggggatgatggtcacatgttgcgtttc
gaatcagcagaagcctgtgcagtagcattgagccaggcagcagaagctgttgcatctgga
gatgcagatgtgaataaagccatgtctgaagctgggatcatcgtattaccaccttctcag
gatttgggtcaaggaggtaacgtggagaaaaatgatatgattgaacaagaatctgcttct
cttaagtggccaacaaaaccggggattccacagtctgatttatttgaccctgaggattca
tggtatgatgctccaccagagggattcagtttgacgttatccccatttgcaacaatgtgg
atggcactctttgcatgggtaacgtcatcttctttggcttatatatatgggagagatgaa
agtgcccatgaagattatttatctgttaatgggagggagtaccctcggaagattgtcttg
agagatggtcgttcttctgaaatcaggcttactgccgaaagttgtcttgctcggactttt
cctggacttgttgccaatctcaggctgccaataccagtatccacactggagcaaggagcg
gggcgcttgctagaaacaatgtcctttgttgatgcacttcctgcatttaggacgaaacaa
tggcaggttattgctcttctcttcattgaggcgctctctgtatgtaggattcctgcactt
acttcatacatgaccagtaggaggatggtgcttcaccaggtgctggatggcgcccatata
agtgcagaagagtatgatattatgaaggatttcatggtacctctaggtcgagaccctcaa
gcaaggagtggagcatag
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