Ricinus communis (castor bean): 8268329
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Entry
8268329 CDS
T01087
Name
(RefSeq) polyprotein of EF-Ts, chloroplastic
KO
K02357
elongation factor Ts
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
rcu03012
]
8268329
03029 Mitochondrial biogenesis [BR:
rcu03029
]
8268329
Translation factors [BR:
rcu03012
]
Eukaryotic type
Elongation factors
8268329
Prokaryotic type
8268329
Mitochondrial biogenesis [BR:
rcu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
8268329
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF_TS
S1
S1_RRP5
EF-Ts_N
RNase_II_C_S1
Tnp_IS2_N
Motif
Other DBs
NCBI-GeneID:
8268329
NCBI-ProteinID:
XP_048227509
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All DBs
Position
3:complement(27363794..27370131)
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AA seq
1148 aa
AA seq
DB search
MTTVVPCSTSSISLIPGTPFRLKKNNNLTRCNLLRKSSKHVISSQRHVLPLLTSVGLFPH
YRRDCNWLHRSIVYGVSATGTDTDVVIEEPESPVTDENSGGASDIPADAAETSENSSIKS
DSNRAPAQTKRSRPGRKSEMPPVTNEELIPGATFTGKVRSIQPFGAFVDFGAFTDGLVHV
SRLSDNFVKDVGNVVSVGQEVTVRLVEANTETGRISLTMRESDDTNKSQQQRDAPATASS
GKPRPGRRNAPKSGQRREDNKISKFVKGQELEGTVKNLTRSGTFISLPEGEEGFLPTSEE
SDGGLESMMGGSSLEVGQEVSVRVLRISRGQVTLTMKKEEDNKLNTELLQGVVHAATNPF
VLAFRKNRDISSFLEEREKMEKVANQPVEPKIPVEVGEQEKQTETVSDILEVQGQPSSSN
EGSDSVTSTVAETLVDETSPKEVAEEPSIAGDDEVPGSIESSSPQSVEAAVQTVEKEAEE
SSGTPDPIGSVSTADNITEQTPLTDEMGSDGKSGPYGEISSEVSTPVSPAAEEVVENQLG
ESITNEELQTPIAENEISSIAPVEDEGTGATSPDENGSITGSGEQADVPSLQEATDGEES
AGNSDHSGSTDAAEMLPTESQEIAEVVENQVESSREEVQTQASAAEAEIPSVIQVDSEKV
DTAPEKSDSFANPNGQSDSFANPNGQSDSSSTEKSVKATISPALVKQLREETGAGMMDCK
KALSETGGDIGKAQEFLRKKGLASAEKKASRATAEGRIGSYIHDSRIGVLVEVNCETDFV
SRGEIFKELVDDIAMQVAACPQVKYLVTEDVPEEIVNKEKEIEMQKEDLLSKPEQIRSKI
VEGRIRKRLEELALLEQPYIKNDKIVVKDWVKQTIATIGENIKVKRFIRFNLGEGLEKKS
QDFAAEVAAQTTAKPVAAPAKEQSVSAEAEEPVEKPPVVAVSAALVKQLREETGAGMMDC
KKALSETGGDLEKAQEYLRKKGLSAADKKSSRLAAEGRIGSYIHDSRIGVLIEVNCETDF
VGRSEKFKELVDDLAMQVVACPQVQFVSTEEIPESILNKEKELEMQREDLASKPENIREK
IVEGRISKRLGELALLEQPFIKDDSVLVKDLVKQTVAAIGENIKVRRFVRFTIGENTEDA
KTETETEA
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgtagtcccatgttctacaagctctatttctctaattcctggaactcccttt
agattaaagaagaataataatcttaccagatgcaatttgctaagaaaatcttcaaaacat
gtaatatcctcacaaagacatgtgttgcctcttctgacgtctgttggattgttcccacat
tacagaagggattgtaattggcttcatagatctattgtgtacggtgtatcagccacaggg
actgatacagatgtagtgatagaggagccagaatcacctgtcacagatgaaaactccggt
ggagcctcagatattccagcagatgcagctgaaactagtgaaaactcctccatcaagtca
gactcaaatcgtgctccagctcaaacaaaacgttcaaggcctggtaggaaaagtgaaatg
ccaccagtaacaaatgaggagctaattcctggtgcaacatttactgggaaagtgaggtct
atccagccatttggtgcttttgttgattttggagctttcacagatggtctggtgcatgtt
tccaggttaagcgacaactttgtaaaggatgtgggaaatgttgtatctgtcggccaagag
gtaacagtgagattggttgaagcaaacactgagacagggcgtatttctctcactatgcgt
gaaagtgatgataccaataagtcgcagcaacagagagatgctcctgccactgccagcagt
ggcaagccaaggcctggtcgaaggaatgcaccaaaatccggtcagagaagagaagataat
aagatctcaaagtttgttaaaggacaggagctagaaggcacagtcaagaatttgaccagg
tctggtactttcatatctctacccgagggtgaggaaggattcctacccacatcagaagaa
tctgatggtggacttgaatccatgatgggaggctcatcattggaggttggccaggaagtt
agtgttcgggtactgcgtatttcaaggggacaggttaccttgacaatgaagaaagaagaa
gataataagttaaatacagaacttctccaaggtgttgtccacgctgcaacaaatcccttt
gttctggcttttcgtaagaacagggatatctcttcatttttggaagagagggagaaaatg
gaaaaagtagcaaatcaacctgtggaaccaaagatcccagtagaagtaggagaacaggag
aaacaaactgaaactgtatctgacatattagaggttcagggacagccttcaagcagcaat
gagggatcagacagtgttacttcgacagtggctgaaacattagtagatgaaacttctcca
aaagaagtggctgaggaaccaagtattgctggtgacgatgaggttccaggaagcatagaa
tctagctcaccacaaagcgtcgaagctgcagttcaaactgtagaaaaagaagcagaggaa
agctctggaaccccagatcctatagggagtgtatctactgcagataatataactgagcag
actcctttaactgatgagatgggaagtgatggaaaatcaggtccatatggagaaatatct
agtgaagtttcaaccccagtaagtcctgctgcagaagaagttgtagagaatcagcttggt
gagtccataacaaatgaagaattgcaaactcctattgcagaaaatgagatttcttccatt
gcaccagttgaagatgaaggcactggagcaacaagccctgatgaaaatggcagtattact
ggctcaggcgagcaagcagacgttccttctcttcaggaagctacagatggagaggaaagt
gctggcaattctgatcattctggaagcacagatgcggctgaaatgctgcctactgaaagt
caggaaattgcagaagtagtggagaaccaagttgaaagctccagggaggaagtgcagact
caagcatctgctgctgaggctgaaattccttctgtcatacaagttgatagtgaaaaagtt
gacacagctcctgagaaaagtgacagttttgctaatccaaatggacaaagtgacagtttt
gctaatccaaatggacaaagtgacagttcttcaactgagaagagtgtgaaagcaaccata
tcaccagcgttggtgaagcagcttcgcgaagaaactggagcaggaatgatggattgcaaa
aaagctctctcagagactggaggggacattggtaaagctcaggagttcctcagaaagaaa
ggattagcaagtgcagaaaagaaagctagcagagccacagctgaaggaagaattggttct
tacattcatgacagcagaattggtgtgctggtagaggtgaattgtgaaacagattttgtc
tcacggggggaaatattcaaggaattggttgatgatatagccatgcaggtggctgcatgc
cctcaagtaaagtatcttgttactgaagatgtccctgaagagattgtgaacaaggaaaaa
gaaatagagatgcagaaggaagatcttttgtcgaaaccagagcagattagatcaaagatt
gtagaaggacgaatcaggaagagacttgaggagctggcattgctggaacaaccatacatt
aagaatgataagattgtggtaaaggactgggtgaaacagacaattgcaaccattggagaa
aatataaaagtgaagaggtttattcgtttcaatcttggtgagggcttggagaagaaaagt
caggattttgctgctgaggtggctgcccaaactacagcgaaaccagttgcagcaccagca
aaagagcagtctgtttcagctgaagccgaggaacctgttgaaaaaccacctgttgtagca
gtttccgctgcacttgtaaaacagctgagagaagaaacaggagcagggatgatggactgc
aagaaagctctgtctgaaacgggaggagatcttgaaaaggcacaggagtatcttagaaag
aaaggtctttcagctgctgacaagaagtctagtcgccttgcagcagaaggcagaataggc
tcctatattcatgattcccgcattggagttctgattgaagtcaactgtgaaacggacttt
gtgggtagaagtgagaaattcaaggaattggttgatgatctagctatgcaagttgtggct
tgcccacaggtacagtttgtgtccaccgaagagatcccagagagcattctcaacaaggaa
aaggagctcgagatgcagagggaggaccttgcgtcaaaaccagagaacataagagagaag
attgttgagggcaggatctcaaagagacttggggagcttgctcttttagagcaacccttc
attaaggatgacagtgttttggtgaaagacctggtgaagcagactgttgctgccataggg
gagaacataaaagtacgaagatttgttcgatttaccattggggagaacactgaagatgca
aaaacagaaacagaaaccgaagcatag
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