Ricinus communis (castor bean): 8268402
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Entry
8268402 CDS
T01087
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 17 isoform X2
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rcu01002
]
8268402
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcu04121
]
8268402
Enzymes [BR:
rcu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
8268402
Peptidases and inhibitors [BR:
rcu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
8268402
Ubiquitin system [BR:
rcu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
8268402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
8268402
NCBI-ProteinID:
XP_015571528
LinkDB
All DBs
Position
2:complement(5204968..5212716)
Genome browser
AA seq
1127 aa
AA seq
DB search
MHVTGDLGFSSLVLVLSLLFPVIGLIIRRKWRLSIARNEEIKRLLVLASEETARAELEAT
VSYGVVPVSRNSYYQCAVCYCPTTTRCARCKAVRYCSGKCQIIHWRQGHKEECRPASATY
EINDDGGSSSQKVAKQEQCDIYSDKCGSSPIATSSEAPLLFNSSSTRAVPLVKDDDIKVN
SVADTSSISGSSRTSFSGFSTSPTGGESSDDFSVGESISSNEIERSDGQISSDSATDELE
PELNKVDQTKPVSPKFASLVDNVDIKEMSKLKQGITLCNSGESQGVPSSTSGQRGSGMLE
SLMIQPGRVSSGFWDRSLDSVVSSNILQSDPDHSNSTGAGKNKLSDSESFQHFRFNLSGS
NVPALNAQSSEVKGIVSDDAPPAPIGIVRPVNGAALSEKLGKDAPIIRSSTSESCEMTSS
MSNKSSQNSNVLESSDLKSVSSSSSYIHLTSSKRDVSHQVDSSISKLGDLKSSSSNQSNI
IVNDTLSTSNLSKSRVSSSSSHTYLASSGNGHPVASLKSGKNDNLEADAVPSSQMTSSSP
SSISGLKSSVRKVVDQLRGPKCGKYSDKGLFSYDLFVKLYASNKVEMRPCGLINCGNSCY
ANAVLQCLAFTPPLTAYFVQGLHSKECVNKEWCFTCEFESLMLKAKEGKSPLSPIGILSQ
LQNIASQLGTGREEDAHEFLRYAIDTMQSVCLKEAGVNALGSFEEETTLIGLTFGGYLRS
KIKCMKCHYKSERHERMMDLTVEIEGDIEKLEDALRRFTGTEILDGDNKYQCGRCKSYEK
AKKKLTILEAPNVLTIALKRFQSGKFGKLNKSIRFPEILDLAPYMSGTSDKSPIYRLYGV
VVHLDIMNASFSGHYVCYVKNVQNKWFKIDDSTVTAVELERVLTKGAYMLLYARCSPRAP
RLIRNRIASSDPKMKGSASRVSAKNTALNSRSSSTHPNVVRFNPNSFPPENMTSVESFYL
KFHHLQRILEEDSSSDNYSFTSSNSDEGSCSTESTRDSTSTDDLSDFIFGGWNSWKSTSD
SDTSSSSSSSSSSPLYTRHLSEMSRSQPDCADSSMEDGTWDRLPRESSRVVDLEVKGGDT
FSCCDTGKECRKLGSSGSCREANSAKVGVNSVKSGVTFRRSMSQRTD
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgcatgttacaggggatctagggttttcgagcctggtccttgtgttatctcttctattt
cctgtcatcgggcttataattcgccgtaaatggcggctttccattgcaaggaatgaggag
atcaagcgactgctggttttagcttctgaagaaactgctagggctgagctggaagccacc
gtctcgtacggtgtcgttccggtctcgaggaatagttattatcagtgtgctgtttgttat
tgtcctactaccacacggtgtgctcgttgtaaagctgttagatactgttctggtaagtgt
caaattatccactggcgtcaaggtcacaaggaagaatgccgccctgctagtgctacttat
gaaatcaatgatgatggaggcagctcttctcagaaggtggcaaaacaagagcaatgtgat
atctacagtgataaatgcggatcttcaccaattgctacatcctctgaggcacctcttttg
tttaattctagcagcactcgtgcagttccacttgtaaaggatgatgatattaaagtcaat
tctgttgcagatacatcctctatttctggctcatctaggacctcattttctggcttctct
acttcacccactggcggtgaatcatctgatgatttttctgttggtgagagtattagctca
aatgaaattgagagatcagatggacaaatatcttctgattctgccactgatgagcttgag
cctgaattgaacaaggtggatcaaaccaagcctgtgtctccaaagtttgctagtttggtt
gataatgtagatattaaagaaatgagtaagttaaagcagggcatcacactttgcaatagt
ggggagagtcagggtgttccttctagcacttcgggtcagaggggcagtggcatgcttgag
tctttaatgattcagcctggtcgagtttcttctggtttctgggacaggagtcttgactct
gttgtgtccagtaatatcctccaaagtgatccagatcattccaattccactggagctggt
aaaaacaagttatctgattctgagtctttccaacactttaggttcaatctatctggaagt
aatgttcctgcattaaatgcccaaagctcagaggttaaaggcattgtatcagatgatgca
cctccagctcctataggtattgttaggcctgttaatggagcggctttgtctgaaaagctt
ggtaaagatgctccgatcatcaggagttccacatctgagagctgtgaaatgactagttct
atgagtaataaatctagccagaattcaaatgtgttagagtccagtgatcttaaatctgta
tcatcatcctcttcatatattcatttaacttcgagtaagagagatgtatcacatcaagtt
gattcaagtatttcgaagttgggtgatcttaaatcctccagctctaaccaatcaaatatt
attgtcaatgacactcttagcacttcaaatctatctaagtccagagtatcatctagctct
tctcatacctatttggcttctagtgggaatggacatccagttgcaagcttgaaatctgga
aaaaatgataatcttgaagctgatgctgtgccttcctcccaaatgactagttcttctccg
agttctattagtggactgaaatcgtcagtgcggaaagttgttgatcaacttagaggacct
aagtgtggcaaatacagtgataaggggctcttttcatatgatctttttgtaaagctgtat
gcttcaaacaaggttgaaatgagaccttgtggccttatcaactgtggaaatagctgttat
gcaaatgctgtccttcagtgcctggcatttactcctcctttgactgcttattttgttcaa
gggctccattctaaagagtgtgtaaataaggaatggtgcttcacttgtgagtttgaaagt
ttgatgttgaaggcaaaggaagggaaatctccactttctcctattggaattttatcccag
ctgcaaaacattgcaagtcagctgggtactgggagagaagaagatgcacatgaatttcta
aggtatgctattgatacaatgcaatctgtttgccttaaagaagctggggtgaatgcgttg
ggttcctttgaagaggaaaccactctcataggtcttacttttggaggctaccttcgttca
aagataaaatgcatgaagtgccattacaagtcggagcggcatgaaagaatgatggatctt
actgttgaaatagaaggggatatagagaagcttgaggatgcacttagaaggttcacaggt
actgagattctagatggagacaacaaataccaatgtggcagatgcaaatcttatgaaaag
gccaagaaaaagttgacaatactggaggctccaaatgtccttacaatcgcattgaaacgc
tttcagtccggtaaatttgggaagctcaacaagtccattcgtttcccggagatcctggat
ttagcaccttatatgagtggcacaagtgacaaatcacccatatacaggctttatggagtg
gttgttcacttggatatcatgaatgcttcattttctggtcattatgtgtgctatgtaaaa
aatgtccagaacaagtggttcaagattgatgacagcacggtaacagctgtagagcttgaa
agggtcctgacaaaaggcgcttacatgcttctttatgcaaggtgctcaccgagggctcca
agattgataaggaacagaatagcatcttctgatccaaaaatgaaaggaagtgcatcaaga
gtcagtgcgaagaatactgcattaaattcaagatcttcatccactcatccaaatgttgtc
cgattcaaccccaattcgtttcctccagaaaatatgaccagtgttgaatctttctatttg
aagttccatcatcttcaaaggattttagaagaggactcatcaagtgataattattctttt
acaagcagcaactctgacgagggttcatgcagtactgagagcacacgagattctacgagt
actgatgacctttctgatttcatttttggtggttggaactcttggaagagcacatctgat
tccgacacttcatcttcttcttcttcttcttcttcttctcccttgtacacaaggcatttg
tcagaaatgagcaggtctcaacctgattgtgcagattcatcgatggaggatggtacttgg
gataggctaccgagggagagtagcagggtggtggatttggaagtgaaaggaggtgatact
ttttcgtgttgtgacacgggtaaagagtgtagaaagttaggaagtagcggtagttgtagg
gaggctaactcggcaaaagtaggagttaactctgtaaaatctggtgtaacatttagaagg
tcaatgagccaaagaacagattaa
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