Ricinus communis (castor bean): 8268447
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Entry
8268447 CDS
T01087
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03030
DNA replication
rcu03420
Nucleotide excision repair
rcu03430
Mismatch repair
rcu03440
Homologous recombination
rcu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
8268447
03420 Nucleotide excision repair
8268447
03430 Mismatch repair
8268447
03440 Homologous recombination
8268447
03460 Fanconi anemia pathway
8268447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rcu03000
]
8268447
03032 DNA replication proteins [BR:
rcu03032
]
8268447
03400 DNA repair and recombination proteins [BR:
rcu03400
]
8268447
Transcription factors [BR:
rcu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
8268447
DNA replication proteins [BR:
rcu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
8268447
DNA repair and recombination proteins [BR:
rcu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
8268447
MMR (mismatch excision repair)
8268447
DSBR (double strand breaks repair)
HR (homologous recombination)
8268447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
RADX
DUF223
CDC24_OB3
Motif
Other DBs
NCBI-GeneID:
8268447
NCBI-ProteinID:
XP_002514062
UniProt:
B9RK18
LinkDB
All DBs
Position
3:complement(28667181..28670399)
Genome browser
AA seq
670 aa
AA seq
DB search
MPVNLTPNAISMINGGDVNMKPLVQVVDIKQIGSAQERYRFLISDSVSTQHAMLATQLND
RVKHGFVKKGSVVQLIDYICSEVQNRKIIVVLNLETIIPECEIIGNAKTLTDMFAQKASQ
NGNSVQSAGVGYNNSSARNHDNNVQNFQPPLSAHNQGSSMHNFRPTFSSQNHGNNMQNFT
SNLSAQNYGNNIQSFQPNVQPPYRPPPNYRNHGAIMKNEAPARIIPIAALNPYQGRWAIK
ARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAVVERFYDVIEVGRVYLISK
GSLKPAQRNFNHLKNEWEIFLEATSTVDLCPDGDNSIPKQQFTFKKISEIENVENNSILD
VIGIVISVNPSVPILRKNGMETQRRILNLKDGSGRNIELTLWGDFCNKEGQQLQEIVDSG
DFPVLAVKAGKVSDFSGKSLGTISSTQLFINPDIPEAHGLKDWFDRGGQHTASVSISRDI
LPGGSKNEIRKTVSQIKHEGLGRSDRPDWVTVSARITFVKTDTFCYTACPLMIGDRQCNK
KVTSSGNSRWQCDRCNQEFDECDYRYLLQVQIQDHTGLTWVTAFQESGEEILGLPAKELY
QLKYEMQDDTKFSDVIRSRLFQQFLFRLKIKEEMYGDEQRVKITVVKAEKVNYSSEGRYL
LDLISQCPRY
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgaatttgacgccaaacgcaatatcaatgataaatggcggtgatgtgaacatg
aaaccgctcgttcaggttgttgatataaagcaaataggaagcgcacaggagaggtatcgt
ttccttatatctgactcggtctccactcagcacgctatgctcgctactcaacttaacgac
cgagttaaacacggttttgttaagaaaggatctgttgttcaattgattgattatatttgc
agcgaagtccagaatcgcaagattattgtcgttctgaacttggaaactataatcccagaa
tgtgaaattatcggaaatgcaaaaacccttactgatatgtttgctcagaaggcatcgcag
aatggaaactctgtacagtcagcaggggttggttataacaactcaagtgctcgtaatcat
gataataacgtgcagaatttccagcctcctttgagtgcccataatcagggctctagtatg
cataatttccgacctactttcagttctcaaaatcatggcaataatatgcaaaatttcacc
tccaatttgagcgcccaaaattatggtaataatattcagagtttccaaccaaatgttcaa
cctccttaccgaccacctccaaattatagaaatcatggtgctattatgaagaacgaggca
ccagcacggatcattcccattgctgctttgaatccttatcaggggcggtgggctatcaag
gctagggtaactgcaaaaggggatctccgtcgttacaacaatgcccgaggagatggtaaa
gtgttctcttttgaccttcttgactctgatggaggtgaaatacgagtgacctgtttcaat
gctgttgttgagcgcttttatgatgttattgaggttggtagggtctatttgatttcaaag
ggtagcttaaaacctgcacagaggaatttcaaccatttgaagaatgagtgggagatattt
ttggaggcaacttcaactgtggacctttgtcctgacggagataattctataccaaaacag
cagtttaccttcaaaaaaattagtgaaatcgagaatgtagaaaacaactccatccttgat
gttattggtattgtgatatctgttaatccatcagttcctatcttgagaaaaaatggcatg
gaaactcagagaagaattttgaatcttaaggatggttctggtaggaacattgagctaact
ctttggggggatttctgcaataaggaaggtcagcagctgcaagagattgttgattctggg
gattttccagttttagctgtcaaagcagggaaggttagtgacttcagtgggaaatcacta
gggacgatttcttctactcagctcttcattaatccagatattcctgaggctcatggtctg
aaagactggtttgatcgagggggacagcatactgcttctgtgtccatttccagagacatt
ttgccaggaggatctaagaatgagatacgtaaaactgtgtctcaaatcaagcatgaaggt
cttggaagatcagataggccggattgggtcacagtgagtgcaagaataacttttgtcaag
acagatacattctgttatacagcttgcccattgatgatcggagatagacagtgtaacaag
aaagtgacaagttcaggaaactcgagatggcagtgtgatagatgtaatcaagaatttgat
gagtgtgattataggtatcttcttcaagttcagattcaagaccatacaggattgacttgg
gtaacagcttttcaggagtctggggaagagatattgggtttaccagcaaaggaattatac
cagttgaagtatgaaatgcaggatgataccaaattctcggatgtaatccggagcagactc
tttcagcaatttctgttcaggcttaagataaaagaggaaatgtacggtgatgaacaaagg
gtgaaaatcactgttgttaaagcagaaaaggtgaactattcttcagagggcagatacttg
cttgatttgatttcacaatgtccaagatattga
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