Ricinus communis (castor bean): 8269133
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Entry
8269133 CDS
T01087
Name
(RefSeq) DDB1- and CUL4-associated factor 13 isoform X1
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rcu03009
]
8269133
04121 Ubiquitin system [BR:
rcu04121
]
8269133
Ribosome biogenesis [BR:
rcu03009
]
Eukaryotic type
90S particles
Other 90S particles
8269133
Ubiquitin system [BR:
rcu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
8269133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Sof1
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_SCAP
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
eIF2A
Beta-prop_NUP159_NUP214
PROPPIN
Peptidase_C69
VID27
Motif
Other DBs
NCBI-GeneID:
8269133
NCBI-ProteinID:
XP_002517863
UniProt:
B9RVU4
LinkDB
All DBs
Position
7:complement(1321972..1326901)
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AA seq
452 aa
AA seq
DB search
MKVKVISRSSDDFTRERSQDLQRVFRNFDPSLRTQEKSIEYVRALNAAKLDKIFARPFIG
AMDGHIDAISCMAKNPNYLKGIFSGSMDGDIRLWDIASRRTVCQFPGHQGAVRGLTASTD
GCILISCGTDCTARLWKVPVATMMESDGPSNRSAEPQAIYVGKNAFWGVDHQWDGELFAT
GGAQVDIWNHNRSQPVNSFEWGTDTVISVRFNPGEPNLLAASASDRSITLYDLRVSSPAR
KLIMRTRTNSIAWNPMEPMNFTAANEDCNCYSFDARKLDEAKCVHKDHVSAVMDIDFSPT
GREFVTGSYDRTVRIFPYNGGHSREIYHTKRMQRVFCVKFSCDGSYIISGSDDTNLRLWK
AKASEQLGVLLPRERKRHEYNEAVKNRYKHLPEIKRIVRHRHLPKPIYKAAEIRRTVTEA
EKRKEDRRRAHSTPGSVVTEPLRKRRIIKEEE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaaagtaatatcacgctcctctgatgatttcactagagaacgaagccaagat
ctccagcgagtgtttcgtaatttcgatcccagcctacggacacaagagaaatcaattgaa
tacgtgagagcactcaatgctgcaaaattggacaagatatttgcaaggccgtttattgga
gcaatggatgggcatattgatgctatttcatgtatggctaaaaaccctaattacttgaaa
gggattttttctggttctatggatggagatattcgcctttgggacatagcttccaggcga
actgtttgtcagtttccaggtcatcaaggtgccgtacgaggtttgacagcctctaccgat
gggtgcattttaatatcctgtggaactgattgcactgcaaggctttggaaagttcctgta
gctactatgatggaatcagatggcccttctaaccgctcagctgagccacaggcaatttat
gttgggaagaacgcgttttggggtgttgatcatcaatgggacggtgagctctttgccaca
ggtggtgctcaagtagatatttggaatcataatagatctcagccagtgaacagtttcgaa
tggggaacagacacagtcatatctgttcggtttaatcctggggaaccaaacctcttggca
gcatcagcaagtgaccgcagcataacattgtacgatttgcgcgtttcatctccagctagg
aaacttatcatgaggacaagaactaattctattgcatggaatcctatggagccaatgaac
ttcacagctgcaaatgaggactgcaactgctacagtttcgatgcaagaaaactggatgaa
gcaaagtgtgtgcacaaagatcatgtttctgcagtgatggatatcgacttctctcctact
ggtcgagaatttgtgacaggatcttatgataggacagtcagaattttcccgtataatggt
ggtcacagccgggaaatctatcatacaaaaagaatgcaaagggtgttttgcgtcaaattc
agctgcgatggtagttatattatttctgggagcgatgatactaaccttaggctatggaaa
gctaaagcatcagaacaattgggagtgctacttccaagggaacgaaaaaggcatgaatac
aatgaagctgtcaagaatcgttataagcacctgcctgagatcaagcgtattgtaaggcac
cgacacttgccaaaaccaatatacaaggctgctgagatcagacgcacagtgactgaagct
gaaaagaggaaagaagatagaaggagagcccatagtactccaggaagtgttgtaactgaa
ccattgcgtaaaagaagaatcatcaaagaagaagagtga
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