Ricinus communis (castor bean): 8269178
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Entry
8269178 CDS
T01087
Name
(RefSeq) RNA pseudouridine synthase 7
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcu03016
]
8269178
Enzymes [BR:
rcu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
8269178
Transfer RNA biogenesis [BR:
rcu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
8269178
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
8269178
NCBI-ProteinID:
XP_002511129
UniProt:
B9RAA4
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Position
4:28148246..28153389
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AA seq
385 aa
AA seq
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MKRKREEENKNDMEIVWQTPANPPEKHDYIFRDGRRHVRPYYFEFISHAKNRWAGKTIVD
LFAEEFKGRPYDYYVSAVKCGRIQVDGETVPVSYIVKSSQKISHFLHRHEPPVTAWDIPV
LYKDPDVVTVYKPATVPVHPCGQYRKNTVVGILQAEHNLAPLFPVHRLDRLVSGLLILAR
NALKADLFRQEIEAGMVQKQYVAKVVGVFPEDEQVVGVNINYNAREGRSTAEVGNSCVDS
PPKGKTACTKFTRISTNGTHSIVLCKPITGRTHQIRVHLQYTGHPIANDFLYLSEHAASR
SAEGMSADRAACSSSYCVTPQDFCSDTHEENSVQDFSIDPMCTNCPNLAPKGYDVYEECL
WLHCVQYSGPGWVYECPYPDWAILS
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaagagagaagaagaaaacaaaaacgacatggagatagtatggcaaacgcca
gccaatccacctgagaaacacgattacatttttcgcgatgggaggcgccacgtcagacct
tactatttcgagttcatttctcatgctaagaatcgttgggcgggaaagacgattgttgat
ttattcgcggaagagttcaaaggcagaccttacgattactatgttagtgctgttaaatgt
ggaaggatacaagttgatggggagaccgtgcctgtttcctatatagtgaaatcatcgcaa
aagataagccatttcttgcacaggcatgaaccgccagtgacggcttgggatattcccgta
ctttataaagatccagatgttgtaactgtttataagccagcaactgttcctgtgcatcct
tgtggtcaatatcgtaagaacactgttgttggcattctgcaggctgaacataatttagca
cctctttttccggttcatcgattagatcggctcgtctctggactccttatcttggctaga
aatgctttaaaggcagaccttttcaggcaagagattgaagctggtatggtgcagaaacag
tatgttgcaaaggtagtcggggtatttccagaggatgagcaagttgttggtgttaacata
aattataatgctcgagaaggaagaagcacagcagaggttggcaactcttgtgttgattcg
cctcctaagggaaagactgcatgtaccaagtttacaagaattagtaccaatggaactcat
agcattgttttgtgtaaaccaatcactggccgaactcatcaaattcgtgtacatttgcag
tatacaggccatcccatagccaatgactttctttacctctcggaacatgctgccagtcgt
tctgctgaaggaatgagtgctgatagagctgcttgtagttccagctattgtgtaacgccc
caagatttttgttctgatacacatgaagagaactctgtacaagatttcagcattgatccc
atgtgtacaaactgtccaaatttggctccaaaaggctatgacgtgtatgaagagtgttta
tggctacattgtgtgcaatattctggacctggatgggtttatgaatgcccgtatccggat
tgggcaattcttagttaa
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