Ricinus communis (castor bean): 8269187
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Entry
8269187 CDS
T01087
Name
(RefSeq) SWI/SNF complex subunit SWI3A
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
8269187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcu03021
]
8269187
03036 Chromosome and associated proteins [BR:
rcu03036
]
8269187
Transcription machinery [BR:
rcu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
8269187
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
8269187
PBAF complex
8269187
GBAF(ncBAF) complex
8269187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
C1_2
RecO_C
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
8269187
NCBI-ProteinID:
XP_002511138
UniProt:
B9RAB3
LinkDB
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Position
4:complement(28083150..28087046)
Genome browser
AA seq
547 aa
AA seq
DB search
METPHHDPTRREEPEFDLYTIPSYSSWFAWDNIHETERAALKEFFDGSSITRTPKIYKEY
RDFIINKYREDPSRRLTFTEIRKSLVGDVTLLNKVFRFLDNSGLINFGADSAPYNDSERE
EIGNFRVEDGPPNGIRVVAMPNSLKPLSVPPQNAEIVENVLRLPPLTSHSDVFGKQIGFV
CGNCGETCNSGRYECSKGEYILCTNCFNNGDYGQNNSKDDYKFNDSVDHSSGTVWSEAET
ILLLESVLKHGDNWDLVVRDVQTKSKLECIAKLIELPFRNLLLSSTLVGDTSGLSGSADY
LKPVPVSSSEKQDAVDNIEGLLPESQNVSEQNGDAADEGSPLKRKRIVSLSDAGSCLMKQ
VALISTMAGPDVASAAAKAAIGALCDETSCPREIFGGKEDFPAKGLWSPTLCSRPERVLY
VKDTEIKERSTQLETEDTSLGQNDIPLTLRLRTAVATSLGAAAAHAKLLADEEDQKIEKL
VTTVVEAQLKKLQYKIKHFDNLELIMEKEYAELEELQESLIEERMDVVQRAIMAGLSKWR
DHSAART
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggagacaccgcatcacgacccgacccgacgagaggaaccagagttcgacctctacacc
atccccagctactccagttggttcgcctgggacaatatccacgagacagaaagagcagca
ttaaaagaattcttcgatggaagctcaattacaagaactccaaaaatctacaaagaatac
agagactttatcatcaataaataccgcgaagatccttctagaagactcaccttcacagag
attcgtaagtcacttgttggcgacgttactttgctcaacaaggtctttcgattcttggat
aattctggattaataaactttggtgccgattcggctccttacaatgattccgagagagag
gaaatcggcaattttagggttgaggatggacctcccaatggcatacgcgtcgttgctatg
ccgaattccttaaagcccctttcggtgccgccgcaaaatgcggagattgttgagaacgtg
ttgagattgccacctttaacttctcattccgatgttttcgggaaacaaatagggtttgta
tgtggtaattgcggcgaaacttgtaattccggccgatatgaatgtagtaagggtgaatat
atattgtgtacaaattgcttcaacaatggagattatggacaaaacaattctaaggatgat
tacaagtttaatgacagtgtcgatcatagcagtgggactgtttggagtgaggcagagact
atacttcttttagaatctgttctaaagcatggagacaactgggaccttgttgtccgagat
gttcaaaccaagagcaaacttgaatgcattgctaagcttattgagctgccattccggaat
ctccttttgagctccacactagttggtgatactagtggactgagtgggagtgcagattac
ttgaaaccagttcctgtgtcttcgtctgagaaacaagatgcagtggataatattgagggt
ctgttgcctgagtcccaaaatgtgagcgaacagaatggagatgctgcagatgaaggctct
ccgttgaaaagaaaacgaattgtttctctttcggatgctggaagttgtttgatgaaacag
gtagctcttatctcaaccatggcaggcccagatgttgcatctgctgcagctaaggctgct
attggagcactttgtgatgagacctcatgtccaagggagatttttggtggaaaggaggat
tttccagctaaaggcttgtggtctcccactctctgttccaggccagagagagtcctttat
gtcaaagatacagagataaaagagaggtccactcaattagaaactgaggatacatccctg
gggcagaatgacatacccttaactttgcgactcagaacagcagttgcaacctctcttggg
gctgctgctgctcatgccaaattattggccgatgaggaagaccagaaaattgaaaaatta
gttaccaccgtagttgaagcacagttgaagaaactgcagtacaagatcaagcattttgat
aaccttgaactgataatggagaaggaatacgccgaattagaggaactgcaagagtcatta
attgaggagcggatggatgttgtacagagggcaattatggctggcttgtctaaatggagg
gatcattctgcagcaagaacttaa
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