Ricinus communis (castor bean): 8269190
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Entry
8269190 CDS
T01087
Name
(RefSeq) recQ-mediated genome instability protein 1 isoform X2
KO
K10990
RecQ-mediated genome instability protein 1
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
8269190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcu03400
]
8269190
DNA repair and recombination proteins [BR:
rcu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
8269190
FA (Fanconi anemia) pathway
8269190
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Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
GBD_ELAPOR1-like_3rd
DUF6297
Motif
Other DBs
NCBI-GeneID:
8269190
NCBI-ProteinID:
XP_015580222
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Position
4:complement(28071675..28076994)
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AA seq
639 aa
AA seq
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MPRRRLTLSSFSDEEEEHEHQQNPQQQRDHDNELHLKQHLPNPNPNLPAEPVTISDDDEE
FIDVSDYLTPPSPPPEQSVPHPPVPPVSSYGCPIDDFLLRMGLKLRREWLDSCLGGLDSS
VRGLDVAAKAKLCFQQFLFSDMNYSGGGLLPPNVDSMHCVNLAGPFVLQVDEIVNISSPL
KGRYRDAPPGIKRCLKLSMTDGVQRVFGMEYRPIKDLQVLAPAGLKVVICNVHIRHGLLM
LVPEALEVLGGIVDELEAARQRLVEEVNKPPRGRRSRSGVVPPLTSRATLAAWPSNGVSF
PENTNSPTDGLDRSNGSATFVSHGNDSVCIHGHSNSSDNDRGPSNNSVNVHGHSNSSSNF
HGNNNRSVNVPGQNNSSNVLGPINSSIFQGAAPLQVEDQGAGTSQRTPEEFAAPRSSVNT
IPDPLSSVLHNVEEMHIDASFERENAVSYQHSNMISNHEDTRMADEFDHPLILSGDREIP
FTYLASLSAKWAAMKEKISSVQGKCFLTGVKGFQYKQRTTYELRVYVDDGSLISEILVDH
NVVQKGIGHSPEEVTAALSSSDAKRVGNMKDTLKQFQIFLVNFEGIIRIEMNRTSSIPIA
LEMNQGCPASDAWLLVRRLKSSPAVTPQRPSSDPIDISP
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggagacgccttacgcttagctctttttcagacgaagaagaagaacacgaacat
caacagaatccacaacaacaacgagaccatgataatgagcttcatttaaaacaacacctt
ccaaaccctaaccctaacctccccgccgaacctgtcactatttccgacgatgacgaagaa
ttcatcgacgtctccgattacctcacgcctccctccccacccccggagcaatcagtacca
caccctcctgttcctccggtaagcagctacggttgtccgattgatgattttctgctgagg
atgggactgaagttaagaagagagtggttggattcttgtcttggtggtcttgatagctct
gttcgtggcctcgatgtagcagccaaggctaagctttgcttccagcaatttttgttttcc
gatatgaattactctggtggcggtttgcttcctcctaatgttgattctatgcattgtgtc
aatctcgccggaccctttgtgttgcaggttgatgagattgttaatattagttctccactc
aaaggcaggtatcgggatgctcctccagggatcaagaggtgccttaagctttcaatgacc
gatggagttcaacgtgttttcggtatggaatataggcccattaaggatctccaagtctta
gcccccgcaggattaaaggttgttatttgcaatgtacatatacgtcatgggcttctaatg
ctggtccctgaagctttagaagttcttggagggatagttgacgagttggaagcagcacgc
caacgtctagtggaagaagtaaataagccaccaaggggaagaagatccaggagtggagtg
gtgcctcctttaacaagtagagcaactctggctgcatggccaagtaatggtgttagtttt
cctgaaaatactaatagccccactgatggtcttgatcgcagtaatggctctgctactttc
gttagtcacggcaatgattctgtttgcattcatggacacagcaatagttctgataatgac
cgtggacccagcaataattccgttaatgtgcacggacacagtaatagttcttctaatttt
catggaaacaacaatcgatctgttaatgtccctggacagaacaatagttctaatgttctt
ggaccaattaatagttccatattccaaggtgcagctcccttacaggtggaggaccaaggt
gctggaaccagtcaaaggactccagaggagtttgctgctccaaggagctcagtgaacacg
attcctgatccattgtccagtgttcttcataatgttgaagagatgcatattgatgcatct
tttgagagggaaaatgctgtgtcataccagcattctaatatgatatcaaaccatgaggat
acccgtatggctgatgagtttgatcaccctctcatactatctggagatcgagaaatccct
tttacatatttggctagtttgtcagctaagtgggctgcaatgaaggaaaaaatatcatct
gttcaaggaaagtgctttttgactggtgtaaagggatttcaatataagcaaaggacaaca
tatgagcttcgggtctatgttgatgatggcagcctcatttctgagatcctagttgatcac
aatgtggtacagaagggaataggtcattctcctgaggaggttactgctgctctttcttct
tcagatgcaaagagagttggtaatatgaaagacacactgaaacaattccaaatattttta
gtgaattttgaggggataatacgtatagagatgaatcgaacctcttccattccaattgcc
cttgagatgaaccagggttgccctgcttctgatgcctggttgcttgtcagaagactgaag
tcttctcctgctgtgacaccacagcgcccctcctcagatcctattgacatatcaccataa
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