Ricinus communis (castor bean): 8269276
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Entry
8269276 CDS
T01087
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00280
Valine, leucine and isoleucine degradation
rcu00650
Butanoate metabolism
rcu01100
Metabolic pathways
rcu04146
Peroxisome
Module
rcu_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
8269276
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
8269276
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
8269276
Enzymes [BR:
rcu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
8269276
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
8269276
NCBI-ProteinID:
XP_002517305
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Position
10:22981202..22988275
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AA seq
426 aa
AA seq
DB search
MLASKKALDKLYKRCTFLSKHTHFTFMFNSDDSSCWQQQGHNSCLEAFSFKAANDKQEAI
LCCAQGRNVSQDDIFNRTRASFGSNSMNIDNVFHSWHLSNRHYTSHSNDKSVGDFVDKLL
RYVPEYVKIVEVGPRDGLQNEKDVVPTAIKVELIKMLVSSGLPVVEATSFVSPKWVPQLA
DAKDVMAAIRDVEGARFPVLTPNLKGFEAAVAAGAKEVAVFASASESFSKSNINCSIEDS
LVRYSDVALAASKLSIPMRGYISCVVGCPIEGMISPSKVAYVAKRLCDMGCSEISLGDTI
GVGTPGTVITMLEAVMEVVAIDKLAVHFHDTYGQALSNILASLQIGIKTVDSSVSGLGGC
PYAIGASGNVATEDVVYMLNGLGVKTNVDLQKVMLAGNFICKHLGRTTGSKTAIALSKIT
AHASKL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgttagcctcaaagaaggctttggataagctttacaagcgttgcactttcttatctaaa
catacccatttcacctttatgttcaattcggacgatagcagctgctggcagcaacaaggc
cacaactcttgtcttgaagctttctctttcaaagctgcaaatgataaacaagaggcaata
ctttgttgtgcacaaggaagaaatgtatctcaggatgatattttcaatcgaacacgagca
agcttcggttcgaattctatgaatattgataatgttttccatagctggcatttgtcaaat
cgtcattatacttcccactctaatgacaaatccgttggcgattttgtagataagctttta
agatacgttccagaatatgtgaaaatagtggaagtgggtccaagggatggattgcaaaat
gagaaggatgttgtacctactgctataaaggttgagttgattaaaatgctagtttcttca
gggctgcctgttgttgaggccacaagctttgtgtcaccgaaatgggtaccgcagctagcc
gatgcaaaagatgtaatggcagccattagagatgttgaaggtgctcgatttcctgtatta
actcctaatttgaaaggttttgaagcagctgttgctgctggagcaaaggaagttgctgtc
tttgcatcagcctcggaatccttttcaaagtcaaatatcaattgcagtattgaagatagt
ctggttcgttacagtgatgttgcccttgcggccagcaagctttcaattcctatgcgtgga
tatatatcatgtgttgtggggtgtccgatagaaggaatgatatctccatcaaaagttgca
tatgtggctaaacgtctctgtgatatgggttgctctgaaatatcccttggtgatacaatc
ggtgttggcactcctggtactgtcattacaatgcttgaagctgttatggaagttgttgcg
attgataagctggctgttcactttcacgacacttacgggcaagctctttcaaatattcta
gcatcactccaaattggtattaaaactgtcgattcatctgtctctggacttgggggctgc
ccatatgctataggggcctctggtaatgtggctactgaagatgttgtttacatgcttaat
ggtctaggagttaagaccaatgtggatctccaaaaggtcatgttggcagggaatttcatc
tgtaagcatttgggacgcacaactggttctaagacagcaatcgccttgagcaaaatcaca
gctcatgcctccaaactttaa
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