Ricinus communis (castor bean): 8269280
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Entry
8269280 CDS
T01087
Name
(RefSeq) ribosome biogenesis protein bms1
KO
K14569
ribosome biogenesis protein BMS1
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
8269280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rcu03009
]
8269280
Ribosome biogenesis [BR:
rcu03009
]
Eukaryotic type
90S particles
GTPase
8269280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
Tsr1_G-like
AAA_16
AAA
AAA_22
MMR_HSR1
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
8269280
NCBI-ProteinID:
XP_048236056
LinkDB
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Position
10:complement(22859000..22871103)
Genome browser
AA seq
1217 aa
AA seq
DB search
MGMDSGSKEQSHKVHRSRQAGPKKQAKSDKKKKTDDNSTEEKKQNPKAFAFNSSVKAKRL
QSRAVEKEQRRLHVPTIDRSYGEPAPYVVLVHGPPQVGKSLLIKSLVKHYTKHNLPEVRG
PITIVSGKQRRVQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGF
PKVMGVLTHLDKFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYPRREIHNLA
RFISVMKFHPLSWRTSHPYVLVDRFEDVTPPEQVHMNRKSDRNVTLYGYLRGCNLKKGTK
VHIAGVGDYSLAGVTALADPCPLPSAAKKKGLRDKEKLFYAPMSGVGDLLYDKDAVYINI
NDHFVQFSKVDDENGGTKQKGKEDVGEVLVKSLQNTKYSIDEKLENSFISLFSRNGTIGS
EIQNDVKDNDKQQRRGIESLGQGDLGRQSEPDGSGEETNTGSDSESSDQDEVAAKDAMEN
GEDGVSNKEHGDTSNHQANLKDHVKQQVEFHGGRFRRKATFGDDIDDKDLKDSDDGSEDD
DDGNGDPGDLSYSDSDVPEEDGYNEDKDDDGLGNVSKWKESLAERTSLKRNINLMQLVYG
TSASTAALNEKQDCTDDEESEDEEFFKPKGEGNKKLNEGLDGTNINTEDCSKFTNYTDLK
NWKEEDIYESIRDRFVTGDWSKAAKRNQPSDANMEDDDDVYGDFEDLETGERYESCKKDE
SGNGALEKEDERVMEERRLKKLAQRAKFDAQYDGSESPEEEVDDKDGAKFHRVQANESGY
FEKLKEEIELQKQRNIAELNDLDEVTRLEIEGFQTGTYVRLEVHDVPFEMVEHFDPCHPI
LVGGIGFGEENVGYMQARLKRHRWHRKVLKTRDPIIVSIGWRRYQTTPVYAIEDCNGRHR
MLKYTPEHMHCLAMFWGPLAPPHTGVVAVHNLSNNQAAFRITATAVVLEFNHAAKIMKKV
KLVGYPCKIFKKTALITNMFTSDLEVARFEGAAIRTVSGIRGQVKKAAKEEIGNQPKKKG
GAPREGIARCTFEDRILMSDIVFLRAWTQVEVPQFYNPLTTALQPREENWQGMKSVAELR
RENNLPIPVNKDSLYKPIERKLRKFNPLVIPKTLQAALPFASKPKDIPSQKRARLENKRA
VVMEPRERQLSKLIQHLQRIRVEKMKKRKLKEEQKRKEYEAEKAKDEQLSRKRQREERRD
RYRVQDKLKKRKRNSEE
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgggtatggacagtggcagcaaggagcagtcgcataaggtccataggtctcgtcaagca
ggtcccaagaagcaggcgaaatcagataaaaagaagaagactgacgacaattcgaccgag
gaaaagaagcaaaaccctaaggcatttgcgtttaattcaagtgttaaggccaagagattg
cagtcacgagctgtagaaaaagagcagcgtagacttcatgtccctactattgataggtct
tatggtgaacccgcgccttatgttgttcttgtacacggaccacctcaggttggcaagtct
ctattgataaaatctcttgtaaagcattacactaagcataatttacctgaagttcgaggc
ccgattaccattgtgtcaggtaagcaaaggcgagttcagtttgtggagtgcccaaatgat
atcaatggcatgattgatgctgcaaaatttgctgatttagctttgcttttgatagatgga
agctatgggtttgaaatggagacatttgaatttttgaatattttgcaagttcatggattc
ccgaaggttatgggagtccttactcacctcgataaattcaaggatgtgaagaagcttagg
aaaacaaagcagagactcaagcatcgtttctggacagaaatatatgatggcgcaaaatta
ttctatttgtctggtcttatacatgggaagtatcctaggcgggagattcacaatcttgca
cggtttatatctgttatgaagttccatccattatcttggagaacttctcacccctatgtt
ttagtagatcgttttgaagacgtaactcctccggaacaagtgcatatgaacagaaaatcg
gatagaaatgtcacactttatggctacttgcggggttgtaatttaaaaaagggtactaag
gtacatattgctggtgttggtgattatagtttggcaggagtcacagccttggctgaccct
tgccctctaccatcagctgcaaaaaagaagggattgagagacaaggaaaagctattttat
gcacccatgtctggcgttggtgatctgctgtatgacaaggatgctgtctatataaacata
aatgaccactttgttcagttttcaaaagttgatgatgaaaatgggggaacaaaacagaaa
ggaaaggaagatgtaggtgaggttttggtgaaatcactacagaacaccaaatattcaatt
gatgagaaattggaaaatagcttcattagccttttcagtaggaatggtactattggatct
gaaattcagaatgatgtgaaagataatgacaagcagcagagacgtggtatagagtctttg
gggcagggtgatcttgggcgacaaagtgaaccagatgggtctggagaagaaactaatact
ggaagtgattcagaatcttctgatcaagatgaagtggctgcaaaggatgctatggaaaat
ggggaagatggtgtttctaacaaagaacatggtgacacatcaaaccatcaggctaatctt
aaagatcatgtgaagcagcaagttgaatttcatgggggaagattcagaagaaaagctact
tttggagatgacattgatgataaggatctgaaggactctgatgatggaagtgaagatgat
gatgatggcaatggtgatccaggtgatctatcatattctgattcagatgtaccagaagaa
gatggatacaatgaagacaaagatgatgatggcctgggcaatgtatcaaagtggaaagag
tcattggctgaaaggactagcttgaaaagaaatattaatctcatgcaacttgtatatgga
acttctgcatcaactgctgctcttaatgaaaagcaggattgcactgacgatgaggaaagt
gaggacgaggagttctttaagccaaaaggggaaggaaataagaaattgaacgaaggattg
gatggtacaaatataaatactgaggactgttccaagtttacaaattatactgatcttaaa
aactggaaagaggaagacatatatgaaagtatccgtgatcgttttgttactggtgactgg
tcaaaagctgccaaaagaaatcaaccctctgatgctaatatggaagatgatgatgatgtt
tatggtgacttcgaagatttagaaacaggtgagagatatgagagctgtaagaaagatgaa
tctggcaatggtgctctagagaaagaagatgagcgtgtgatggaggagcggagactgaaa
aagctagctcagcgtgcaaaatttgatgctcaatatgatggatctgaatcaccggaggag
gaagttgatgacaaagatggagctaagtttcaccgagtacaggccaacgaaagtggatac
tttgagaagttgaaggaggagattgaacttcagaaacaaaggaatattgcagaactcaac
gaccttgatgaggtaactcgattagagattgagggcttccaaacggggacatatgtgaga
ttggaggtgcatgatgttccttttgagatggttgaacattttgatccctgccacccgatt
ttggttggaggaattggttttggtgaggagaatgttggatatatgcaggcaaggttaaag
aggcacagatggcataggaaggtactgaagactagggaccctataattgtatctattggc
tggaggcgttaccagaccacacctgtgtatgcaattgaggattgcaatggaaggcatcgt
atgcttaagtatactccagaacacatgcattgtcttgccatgttttggggtccacttgct
cctcctcacactggggtggttgctgtccataatctatcaaacaatcaggcagcatttcgg
ataactgcaactgcagttgtactcgagttcaaccatgcagcaaaaataatgaagaaagtc
aagttggttggttacccatgtaagatcttcaagaagactgcactaattacaaatatgttc
acttcagatcttgaagtagctaggtttgaaggtgctgctattcgaactgttagtggaatc
cgggggcaggtgaagaaggctgcaaaagaagagattggcaaccaaccgaaaaaaaagggt
ggggcaccacgagaaggaattgccaggtgcacctttgaggacaggattctgatgagtgac
attgttttcctgcgtgcatggactcaagttgaagttcctcaattttataatcctttgaca
acagcattgcaacctcgtgaggagaactggcaagggatgaaatcggtggctgaattaagg
agggaaaataatcttcctatccctgttaacaaggattccttgtataagccaattgaaaga
aagcttaggaagtttaacccattggtgatacccaagacactacaggcagcactcccattt
gcatctaaaccaaaggatatacccagtcagaaacgggcccgacttgaaaataaaagagct
gttgtcatggaacctcgagagcgacaactttctaaacttattcaacaccttcaaaggatt
agagttgagaagatgaagaagcgaaagcttaaggaagagcagaagagaaaggaatatgaa
gcagagaaagccaaggatgagcaattgtcaagaaagcggcagagagaagaaaggagggac
agatatagggtgcaagacaaactgaagaaaagaaaaagaaattcggaggagtga
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