Ricinus communis (castor bean): 8269725
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Entry
8269725 CDS
T01087
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
8269725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8269725
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
8269725
mRNA degradation factors
5'-3' decay
Decapping complex
8269725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
8269725
NCBI-ProteinID:
XP_002530530
UniProt:
B9SX11
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Position
10:16661068..16666278
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AA seq
366 aa
AA seq
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MSQTGKLMPNLDQQSTKMLNLTVLQRIDPFIEEILITAAHVTFYEFNIESNQWSRKDVEG
SLFVVKRNTQPRFQFIVMNRRNTENLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYNS
RECEEVANLFTRILNAYSKVPPKSKVPSSKSEFEELEAVPSMSVIEGPLEPSSTASAATD
GPEDSSFESFFTAATNIGSSASNLANSRQPYPSPATVPLSSHAPNIVLPPSQTPQIPTLS
LSPLPASVTIRETPDPISSSNRVTNLVKPSSFFTPPSSSAPVAPPISSAVPTAPSLHPPL
NLQRPYGTPMLQPFPPPTPPPSLTPSSATTMPVINRDKVRDALLTLVQDDQFIDLFYQAL
LKVHHS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaacgggaaaattgatgccaaatctagatcaacagagcactaagatgcttaat
ctcactgttcttcaaagaatcgatccttttattgaagagattttgattactgctgctcat
gtcactttctatgagttcaatatcgagagtaaccagtggagtcgaaaagacgttgaagga
tctctatttgttgttaagaggaatactcaaccgcggtttcagtttattgtaatgaatcgg
cgaaatacagaaaacctagtagagaatttattgggcgatttcgagtatgaagttcaagtt
ccatatctattatatcgaaatgcagcccaagaagtcaatggtatttggttttacaattca
cgtgaatgtgaagaagttgctaatctctttactaggatacttaatgcatactcaaaagtt
cctccaaagtcaaaggtaccatcgagcaaaagtgaatttgaggaacttgaagcagtccca
agcatgtcagtgattgaaggccccctggaaccttcatcaactgcctctgctgccactgat
ggtcctgaagattcttcgtttgagagtttctttactgcggccacaaatatcggaagtagt
gcatctaatttagcaaattctagacaaccttatccttctccagccactgtcccattatcc
tcccatgctcctaatattgttctccctccttcacaaactccacaaataccaaccctttct
ctttcccctttgcctgcttcagtaaccattcgtgagactcctgatccaatcagcagtagc
aatcgtgttactaatcttgtgaaaccctcttcattttttactccaccttcttcatctgca
ccggtggctccacctatctcttcagccgtgcctactgcgccctcccttcatcctcctcta
aacctgcaacgcccatatggtaccccaatgcttcaaccttttccacctccgactccaccg
ccatctcttactcctagttctgctaccactatgcctgttattaacagagataaagtccgt
gatgcacttttaacacttgttcaggatgatcaatttattgacttgttttaccaagcactg
ctgaaggtgcatcactcttga
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