Ricinus communis (castor bean): 8270330
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Entry
8270330 CDS
T01087
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcu03041
]
8270330
Spliceosome [BR:
rcu03041
]
Common components
Common spliceosomal components
General mRNP proteins
8270330
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
8270330
NCBI-ProteinID:
XP_002516388
UniProt:
B9RRL9
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All DBs
Position
1:14873473..14884861
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AA seq
609 aa
AA seq
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MDFDEYEYLEKTVENPEPHKTKEAANGGDGAMKSGEKDSSRSSKHRSNEKDDGDDDNRRS
KRPKSGDESRDPDQRKERGSSRQRSRSRDGERDHHRSSREHKDRDRGREREKERDREERN
GKERDRDRDRERERERERDRDRKERDRESEKDKEREKERSRRSRSRSDKHRIELDEKERE
KSRDREFRERERERESRERDRESRRYNKEKKEEAAEPEADPERDQRTVFAYQICLKADER
DVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQPVMVKP
SEAEKNLVQSTTTVNAGSGPYSGGARRLYVGNLHFNITEDQLRQVFEPFGIVELVQLPLD
ETGHCKGFGFVQFARLEDAKNALNLNGQVEIAGRPIKVSTVTDQTGMQDSTTNAGDFDDD
EGGGLALNARSRAILMQKLDRSGTASSIAGSLGTSAASTGLAVPTAPILGAAPVIPPIVA
PLISGSAPAFPGLPGASVQLPGAIPSVDTIGVPSECLLLKNMFDPSIETEPDFDLDIKED
VQLECSKFGNLQHIYVDKNSAGFVYLRFENTQSAISAQRALHGRWFAGKMITATFMVPQV
YETKFPDSR
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggactttgatgagtatgaatacctggagaaaacagttgaaaaccctgaacctcataag
acaaaggaagctgccaatggtggtgatggtgccatgaagtctggggagaaagatagcagt
cgcagttcaaaacataggagcaacgagaaggatgatggggatgatgacaaccgtcgctca
aagcgcccaaaatctggagatgagtctcgtgatcctgatcagcgtaaagaacgcggttca
tctcgtcagcgatcacgatctagagatggagagagggaccatcatcgaagtagccgagaa
cataaagatagggatagaggtagagagagggagaaagaaagagatagggaagaaagaaat
gggaaagagagagacagagatagagatagagagcgggaacgtgaacgggaacgtgatcgg
gacaggaaggagcgggatcgtgaaagtgaaaaggacaaggaaagggaaaaagagcgttca
cgccgaagcaggagcagatctgataagcatcgaattgagttggatgagaaggagagagaa
aagagccgtgacagggaatttcgagaaagagaaagagagagggagtccagggaacgtgat
agggaaagcagaagatataataaagagaaaaaggaagaagctgcagagccagaagctgat
cctgaacgggatcagagaacagtatttgcgtatcaaatatgcctgaaggcagatgagaga
gatgtctatgaatttttctcgagggctggcaaggtgcgagatgtacggctcataatggat
cgcaattcaagacgttcaaagggagtggggtatattgaattctatgatgttatgtcagtg
ccaatggccatagcactctctgggcaacctcttcttggtcaaccagtaatggtgaaacct
tcagaagccgaaaaaaatcttgttcagtcgactacaactgtgaatgctggatctggtcca
tactctggtggggctagaaggttgtatgttggcaatctgcactttaacataacagaagat
cagcttcgacaggtttttgagccatttggtattgtggagttggtgcaattgcctcttgat
gaaactggccactgtaaaggctttgggtttgttcagtttgcgcgtcttgaagatgctaag
aatgccttaaatttgaatggacaagtggagattgcaggtcggccaatcaaggtgtcaact
gttactgatcaaacaggaatgcaagacagtacaacaaatgctggtgattttgatgatgat
gaaggtggtggcttggctctgaatgcacgttctcgagcaattttgatgcagaagttggat
cgcagtggcaccgcctcaagtattgctggttcattgggaacatctgctgcaagtactggc
cttgctgtaccaacagcaccaattcttggtgctgcacctgtcatacctcctattgttgct
cctcttatttcgggttctgctcctgctttccctggacttccaggtgcaagtgttcagctt
cctggtgctattccttcagtggatacaattggcgtcccaagtgaatgtttattactgaag
aatatgtttgatccaagtatagagacggaaccagactttgatttggatattaaagaagat
gttcaactggaatgctccaaattcggaaatctgcagcatatttatgtggacaagaatagt
gctgggtttgtgtatctgagatttgagaatacacaatctgctattagtgcacaacgggcg
ttgcatggtagatggtttgctggcaagatgatcactgcaacattcatggtaccccaggtc
tatgagactaaattcccggatagcagatag
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