KEGG   Ricinus communis (castor bean): 8270416
Entry
8270416           CDS       T01087                                 
Name
(RefSeq) small RNA degrading nuclease 5
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    8270416
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rcu03009]
    8270416
Ribosome biogenesis [BR:rcu03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    8270416
SSDB
Motif
Pfam: RNase_T Herpes_UL33 EloA-BP1
Other DBs
NCBI-GeneID: 8270416
NCBI-ProteinID: XP_002520248
UniProt: B9S2M9
LinkDB
Position
2:complement(7931400..7938134)
AA seq 572 aa
MPSPCPSPKHEIQAVSSSKEDDSTDNCNNITNNYFDIYGPQAKAEIVFKMPEANQTLNLE
DVQGLVTWVLAEGFMPSWVFIKNKPLIPKVAMLFIPGLDASLYLSHSKLLASFKEYCSNP
RALLALSCVSDVMQTVDALLTCKMKRKRDRADSFSRKSMQTSEQGDLSSIELMKDLPFPP
TYYTLTTKQLEENDYPISQPGFVSTLPAPSGSSAYDMLALDCEMCITKEGFELTRVTVVD
VKGQVVLDKLVKPSNPIIDYNTRFSGITCEMLNGVPTSLKDVQEDFLKLVHKETLLIGHS
LENDLSALKISHGLVIDTAVLYKHPRGGSYKTALRVLAKKFLSREIQQSGDGHDSIEDAR
AAMELALLKIKNGPDFGSPPSFVRRKLLTILSESGKASSVIDDVSIVKRYASESSHAFPV
SSDDDALSKALKEVKNDRVHFVWTQLSELNSYFKKQADDEGKVNAKLAEMISLLTCQKKS
ANTKGVRCSMTSELKEILIRMDARVRCLYSALPTNTMLIICTGHGDTAIVRRLRKLLTEK
QETRICREKIVKVLEELQAQAEVALCFVGVKN
NT seq 1719 nt   +upstreamnt  +downstreamnt
atgccatctccatgtccatctccaaagcatgagatccaagctgtatcttcttcaaaggaa
gatgattcaactgataattgtaacaacatcaccaacaattacttcgatatctatggacca
caagcaaaagctgaaattgtttttaagatgccagaagctaatcaaactttgaatttggaa
gacgttcaagggcttgtaacctgggtgcttgctgaagggttcatgccgtcatgggtattt
attaagaacaagcctctcattccaaaagtggctatgcttttcatccctggcctggatgca
tcattatatttatcacactctaagttactagctagttttaaagaatactgcagcaatcca
agggcccttttagcactgagctgtgtatcagatgtaatgcaaacagttgatgcacttcta
acatgcaagatgaagagaaagagagatagagctgattcattttcaaggaaatctatgcag
acatctgaacaaggggatttatcatcaattgaactcatgaaagacctacctttcccaccg
acatattatacacttactactaaacaacttgaagaaaatgattatcctattagtcaacca
ggttttgtttctacccttcctgcaccttcaggttcttctgcttatgatatgctggcactt
gattgtgaaatgtgtatcacgaaggagggctttgagttgacaagagtgacagtggtggat
gttaaaggacaggttgtactggataaattggttaaaccatcaaaccctatcattgactac
aataccaggtttagtggaattacatgtgagatgctgaatggggtacctacaagccttaaa
gatgttcaggaagatttcttaaagctggttcacaaagaaactctcctgattggccactcc
ttggaaaatgatttgtcagctctaaaaatctctcacggattggtaattgatactgctgtg
ctatacaagcatccccgaggtggatcttataaaactgctcttagagttcttgccaagaaa
tttctttctagagaaatacagcaatcaggggatggacatgacagtattgaagatgcaaga
gcagctatggaactagcattgttaaagattaaaaatggacctgattttggttctcctcca
tcatttgtacggagaaaactcctcactattttaagtgagtctggtaaagcctcctctgtt
attgatgatgtttccatagtgaagcggtatgcttctgagtcatctcatgcatttcctgtg
tcttctgatgatgatgcactctcaaaggcccttaaagaggtgaagaatgatcgtgtacac
tttgtctggacccagctgtcagagttgaattcttatttcaagaagcaagcagatgatgaa
gggaaagtaaatgctaaactggccgagatgatatctttgctaacatgtcaaaagaaatct
gcaaatacaaaaggtgtcaggtgcagtatgacatctgaactaaaggaaattcttattagg
atggatgcaagggtgcgttgtctatattctgcattgccgactaacacaatgctcataatt
tgcactggacatggagatacagcaattgttagaagactgcggaaactgctcacagaaaag
caagaaaccaggatatgccgtgagaagattgtaaaggtcttggaagaacttcaggcccaa
gctgaagtagcattgtgttttgtaggtgtgaagaactga

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