Ricinus communis (castor bean): 8270496
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Entry
8270496 CDS
T01087
Name
(RefSeq) amino acid transporter AVT1A isoform X3
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
8270496
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcu02000
]
8270496
Transporters [BR:
rcu02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
8270496
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Paralog
GFIT
Motif
Pfam:
Aa_trans
EptA_B_N
Motif
Other DBs
NCBI-GeneID:
8270496
NCBI-ProteinID:
XP_015579495
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Position
10:21938377..21944552
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AA seq
495 aa
AA seq
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MASETDIFLNDGGDAGVCGRSSGEEVDEKGEECGALLSQQRPQSFRETTESYSISMSRNH
GFLGQGESSLNSCVGNYSTSNLEKDIKSPLLPDNENKYQKEDSRMVSSAAQLSFSKASFA
SDELSIPHGCSVMQTVFNLVNIMVGVGLLSTPSTIKEAEGIITYSDIGEAAFGKYGRLAV
SIILYIELYSYCVEFITLEGDNLNRLFPGTSLELAGLHLDSMHFFGILTALVVLPTVWLR
DLHVISYLSAGGVIVTSLIVLCVLFLGTAGGVGFHHTSPLVKWNGIPFAIGVYGFCCGGH
PVFPNIYQSMADKRKYTKAAIICFILCFLLYGGVAVMGFLMFGEDTLSQITLNMPPHAIT
SKVALWITVINPLTKYALLMNPLARSIEELLPVGVSNSLWCFIFLRTALVFSTVCVAFLL
PFFGLVMAFIGSVLCLLLAAILPSLCFLRIKGKSATRTQTILSRTIIALGIICVIIGAYS
SLSEIAKQYWNMQMV
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggagactgatattttcttgaatgatggcggtgacgctggtgtttgtggtaga
agcagtggagaagaggttgatgaaaaaggtgaggaatgtggtgctttactttctcagcaa
cggccgcagagttttagagaaacaactgaatcttactcaatctcaatgtcacgaaaccat
gggtttcttggacaaggagaaagctctcttaattcatgtgttggaaactatagtacaagt
aatttagagaaggatataaagtctccgttactgcctgataatgaaaataaatatcagaag
gaagactcccgtatggtctcctcagcagctcaactgtcattttcaaaagcttcatttgct
agtgatgaattatccatccctcatggatgtagcgtcatgcagactgtcttcaacttggtc
aatataatggttggagttgggcttctttctacaccttctacaataaaagaagcagaaggc
attataacctactcagatataggagaagctgcttttgggaaatatggacgtcttgctgta
tctatcattctatacatagagttatattcatattgcgtggaatttattactctggagggt
gataatcttaataggctatttcctggaacatccttggagttggctggtcttcatcttgac
tccatgcacttctttggaattctaactgctcttgttgtgctgccaacagtttggctaaga
gatcttcatgtcatctcatacctttcagctgggggggtcatagtaacaagtttgattgtg
ctttgtgtgcttttccttggtacggcaggcggagttgggtttcatcacactagtcctttg
gtgaagtggaatggcattccatttgcaattggtgtttatgggttctgttgtggtgggcac
ccagtttttccaaatatctaccaatcaatggctgataaaagaaaatataccaaggcagcg
ataatatgctttatcctatgttttctgctttatgggggtgttgctgtgatgggatttctt
atgtttggtgaagatacactatctcagataaccttgaatatgccaccacatgccatcact
tcgaaagttgccttgtggattacagtgatcaaccctctcacaaaatatgcactattgatg
aacccattggccaggagcatagaggagctactgccagttggagtatcaaatagtttgtgg
tgcttcatttttctaagaacagcccttgtcttctctactgtctgtgtagcttttcttctt
ccattttttggtcttgtaatggcctttattggttctgtcctctgtttacttttggctgca
attctgccatctttatgctttttaaggataaaggggaagagcgccacaaggacacagacc
attttgagcagaacaattattgcattgggcatcatatgtgtaatcattggagcatactct
tccttgtcggaaattgcgaaacagtactggaatatgcagatggtctaa
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