Ricinus communis (castor bean): 8270561
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Entry
8270561 CDS
T01087
Name
(RefSeq) LOW QUALITY PROTEIN: probable acyl-activating enzyme 16, chloroplastic
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00061
Fatty acid biosynthesis
rcu00071
Fatty acid degradation
rcu01100
Metabolic pathways
rcu01212
Fatty acid metabolism
rcu04146
Peroxisome
Module
rcu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
8270561
00071 Fatty acid degradation
8270561
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
8270561
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rcu01004
]
8270561
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcu04147
]
8270561
Enzymes [BR:
rcu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
8270561
Lipid biosynthesis proteins [BR:
rcu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
8270561
Exosome [BR:
rcu04147
]
Exosomal proteins
Exosomal proteins of breast milk
8270561
Exosomal proteins of breast cancer cells
8270561
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
RuBisCO_activase_AAA_helical
Motif
Other DBs
NCBI-GeneID:
8270561
NCBI-ProteinID:
XP_048227754
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Position
1:19541195..19587936
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AA seq
694 aa
AA seq
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MLESFISKEICRALSIPFPIEKEEEKKVKRCSPYLEKALLKSNGELVPDEWKAVPDIWRT
SAEKYGDRVALVDPYHDPPTNFTYNQLEQEILNFSEGLRVIGVKPNEKVALFADNSCRWL
VADQGIMAMGAINVARGSRSSVEELLQIYNHSESVALVVDSPELFNRIAETLCSNAVITF
IILLWGEKSSLAIXGMDGIPVFNYKQIVNLGRESRRALHDSDDAWQRYVYETISSDDVAT
VIYTSGTTGNPKGVMLTHKNLLHQINNLLDVFPAEPGDRFLSMLPPWHVYERTCEYYIMT
LGVEXVYTIVRNLKEDLKQYQPHYMFSVPLVYETLYSGIQKQISRSSTIHKLVALTFIRV
SLAYMEFKRIYEGTFLTRIQKQPSYLISLLDCLWARIMAAILLPVHMLAKNLFYHKIHLA
IGISKAGISAGGSLPMHVDKFFEAIGVKLQNGYGMTESSPVTAVRRPTCNVLGSIGHPIR
HTEFKVVDAETDEALPDGSKGIVKVRGPQVMKGYYKNPWATKQVLDEEGWLNTGDIGWIA
PHHSIGRSRQCSGVVVLEGRAKDTIVLSTGENIEPSEIEEAAMRSALIQQIIVIGQDQRR
LGAIIVPNKEEVLLAAKKLSIIDANTSELKKEQMASMLDEELRNWTSSCSFKVGPILIVD
EPFTIESGLMTPTMKIRRDRVMDQYREQIANLYK
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagagcttcattagcaaggaaatctgcagagctctctccattcctttccctata
gagaaggaggaggaaaagaaagtgaaaaggtgttcaccttatttggagaaggcattgctt
aaaagtaatggggagttggtacctgatgagtggaaagcagttcctgatatttggagaact
tcagccgagaaatatggtgatagggttgcattggtggatccatatcatgacccacctacc
aatttcacttataatcagttggagcaggaaattttaaatttttctgagggcttaagagtt
attggagtaaagccaaatgagaaagttgctctttttgctgataattcttgtcgatggctt
gtagcagatcaaggtataatggctatgggagcgattaatgttgcgaggggatcaagatca
tctgttgaagagctattacaaatatacaatcattctgaaagtgttgcacttgtagtggac
agtcctgaattgttcaatcgaattgcagaaacactatgttccaatgcagttatcacattt
atcattctactttggggagagaaatcaagcttagctatttaaggaatggatggcatacct
gtttttaattacaaacagattgtaaacttgggacgagagagccgtagagctctgcatgat
tcagatgatgcttggcaacggtatgtgtatgaaacaataagctcagatgatgttgctaca
gtcatttatactagcggaaccacaggaaatccaaaaggagtcatgcttacacataagaat
ttgttgcaccagataaataatctattggacgtttttcctgccgaacctggggatagattt
ctaagcatgctacctccttggcatgtgtatgagcggacttgtgagtattatataatgacg
cttggagttgagtaagtatacacaattgtgagaaatttaaaggaagatctcaagcagtat
cagccacattacatgttctctgttcctttagtatacgagacactgtacagtgggatacaa
aagcagatctctagaagttccactattcataagcttgttgcacttacattcataagggtc
agcttggcatacatggagttcaagagaatttatgaggggacttttttgaccaggattcag
aagcaaccatcatatctcatttcactattggactgtctatgggcaagaatcatggctgca
atcttgttgccagtgcatatgctggctaagaatcttttttaccataaaattcatttagct
attggaataagcaaggctggcataagtgctggtggcagtttacccatgcatgttgataag
ttttttgaggcaattggcgtaaaactccagaatgggtatggtatgacggagtcatctcca
gttactgctgtccgacgacctacttgtaatgttcttggttcaattgggcatccgattcgg
cacacagagtttaaagtggtagatgctgaaactgatgaagctcttccagatggatcaaaa
gggattgtgaaagtcagggggcctcaagtgatgaaaggttactataagaatccttgggcc
acaaagcaagtattagatgaggaaggttggctaaatactggtgatataggctggattgct
cctcaccactcaattgggcgaagccgccaatgtagtggtgttgttgtcttggagggacgt
gctaaggataccatagttctttcaacaggtgaaaacattgagccctcagagattgaggaa
gctgctatgagaagtgcccttattcaacagatcattgtcattggtcaggaccaacgtcgt
cttggagctataattgttccaaacaaagaagaggtacttctagctgcaaaaaaattgtcc
attatagatgccaacacctctgagctgaagaaggagcaaatggcaagcatgctagatgag
gaacttaggaattggacatcaagttgttcatttaaagttggaccaatactcattgtggat
gagccttttacgattgaaagtggcttgatgaccccaaccatgaaaatcagaagggacaga
gtcatggatcaatacagagagcagatagccaatctctacaagtag
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